Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMX3A6NHT5 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMX3A6NHT5 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMX3A6NHT5 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMX3A6NHT5 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMX3A6NHT5 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 MTCO1P7-201ENST00000419523 1542 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMX3A6NHT5 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMX3A6NHT5 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMX3A6NHT5 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMX3A6NHT5 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMX3A6NHT5 RNU6-666P-201ENST00000363499 107 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMX3A6NHT5 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMX3A6NHT5 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMX3A6NHT5 AL023284.3-201ENST00000407767 334 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 RN7SKP85-201ENST00000411349 318 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 LINC01347-201ENST00000417964 355 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC008173.1-201ENST00000418901 264 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC007562.1-201ENST00000421819 517 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 VTI1BP4-201ENST00000427516 527 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC073900.1-201ENST00000429766 776 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC005189.1-201ENST00000431286 310 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 MTCO1P52-201ENST00000433928 531 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 RPS21P1-201ENST00000434479 247 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 AL604028.2-201ENST00000437848 788 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AL161626.1-201ENST00000441480 490 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC023274.2-201ENST00000445264 521 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC093719.1-201ENST00000480427 441 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 IMPA1P1-201ENST00000510718 842 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 EIF3KP1-201ENST00000513279 656 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC010476.1-201ENST00000519111 851 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC027369.2-201ENST00000528030 440 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMX3A6NHT5 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC090826.1-203ENST00000569235 490 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 RN7SL311P-201ENST00000579858 306 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 MIR5705-201ENST00000579870 89 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 MIR4470-201ENST00000583453 72 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 GLYATL1P2-202ENST00000588046 902 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC002069.2-201ENST00000603580 883 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AL158050.2-201ENST00000605336 568 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 RMST_10.1-201ENST00000616309 154 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC145207.9-201ENST00000623802 325 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC004808.1-201ENST00000627671 721 ntBASIC5.65□□□□□ -1.5
HMX3A6NHT5 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMX3A6NHT5 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC5.65□□□□□ -1.5
HMX3A6NHT5 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
HMX3A6NHT5 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC5.65□□□□□ -1.51
HMX3A6NHT5 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
HMX3A6NHT5 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
HMX3A6NHT5 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.65□□□□□ -1.51
HMX3A6NHT5 PPBPP2-201ENST00000513150 1362 ntBASIC5.65□□□□□ -1.51
HMX3A6NHT5 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.65□□□□□ -1.51
HMX3A6NHT5 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
HMX3A6NHT5 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMX3A6NHT5 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.65□□□□□ -1.51
HMX3A6NHT5 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMX3A6NHT5 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
HMX3A6NHT5 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.64□□□□□ -1.51
HMX3A6NHT5 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMX3A6NHT5 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMX3A6NHT5 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMX3A6NHT5 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMX3A6NHT5 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.64□□□□□ -1.51
HMX3A6NHT5 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
HMX3A6NHT5 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.64□□□□□ -1.51
HMX3A6NHT5 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMX3A6NHT5 CASC19-228ENST00000641414 1684 ntBASIC5.64□□□□□ -1.51
HMX3A6NHT5 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.64□□□□□ -1.51
HMX3A6NHT5 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
HMX3A6NHT5 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMX3A6NHT5 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMX3A6NHT5 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC5.64□□□□□ -1.51
HMX3A6NHT5 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMX3A6NHT5 SNORA30B-201ENST00000365319 129 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms