Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC010872.1-201ENST00000624225 675 ntBASIC6.27□□□□□ -1.41
TCRBV5S1A1TA0A578 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
TCRBV5S1A1TA0A578 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV5S1A1TA0A578 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV5S1A1TA0A578 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
TCRBV5S1A1TA0A578 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV5S1A1TA0A578 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.27□□□□□ -1.41
TCRBV5S1A1TA0A578 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV5S1A1TA0A578 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV5S1A1TA0A578 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV5S1A1TA0A578 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV5S1A1TA0A578 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 RBPJP7-201ENST00000442803 1447 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 RBPJP5-201ENST00000449433 1447 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 MIR1275-201ENST00000408770 80 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AL445928.1-201ENST00000435545 222 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AL645638.1-201ENST00000440519 361 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AL356390.1-201ENST00000455684 397 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AC023245.1-201ENST00000468501 517 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 RPL12P24-201ENST00000474907 486 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AC110760.3-202ENST00000515177 371 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 snoU109.5-201ENST00000516231 132 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 RN7SKP183-201ENST00000517169 324 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 NPM1P42-201ENST00000560329 862 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AL049840.6-202ENST00000603373 279 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AC004801.6-201ENST00000616571 978 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AC109809.1-201ENST00000619665 545 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AL049777.1-201ENST00000622740 518 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AC097520.1-201ENST00000624435 385 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 SNX18P12-201ENST00000624821 759 ntBASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV5S1A1TA0A578 AC097634.1-201ENST00000604491 2467 ntBASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 HSPA8P19-201ENST00000505359 1517 ntBASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 HSPD1P9-201ENST00000420325 1636 ntBASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 AC099677.3-201ENST00000427081 395 ntBASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 RPL12P16-201ENST00000431098 498 ntBASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 MTND4LP7-201ENST00000431728 294 ntBASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 GEMIN2P1-201ENST00000454246 752 ntBASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 AL603882.1-201ENST00000463059 681 ntBASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 AC104339.1-201ENST00000465478 348 ntBASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 AC005165.2-201ENST00000466070 380 ntBASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 ATG10-AS1-201ENST00000504846 648 ntBASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 RNA5SP116-201ENST00000516132 98 ntBASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.25□□□□□ -1.41
TCRBV5S1A1TA0A578 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms