Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 TUBB8P6-201ENST00000436895 1288 ntBASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 YBX1P10-201ENST00000444752 975 ntBASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 AL136038.3-201ENST00000561909 1096 ntBASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 AL023803.3-201ENST00000615559 522 ntBASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 AC008622.2-201ENST00000617006 1229 ntBASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 FXN-203ENST00000396366 922 ntTSL 2 BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PTCH2Q9Y6C5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PTCH2Q9Y6C5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PTCH2Q9Y6C5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTCH2Q9Y6C5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.17
PTCH2Q9Y6C5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTCH2Q9Y6C5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.33■■□□□ 1.17
PTCH2Q9Y6C5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTCH2Q9Y6C5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTCH2Q9Y6C5 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.33■■□□□ 1.17
PTCH2Q9Y6C5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.33■■□□□ 1.17
PTCH2Q9Y6C5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC22.33■■□□□ 1.17
PTCH2Q9Y6C5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.33■■□□□ 1.17
PTCH2Q9Y6C5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PTCH2Q9Y6C5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PTCH2Q9Y6C5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PTCH2Q9Y6C5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PTCH2Q9Y6C5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PTCH2Q9Y6C5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.32■■□□□ 1.16
PTCH2Q9Y6C5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
PTCH2Q9Y6C5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCH2Q9Y6C5 FDX1P1-201ENST00000449115 551 ntBASIC22.32■■□□□ 1.16
PTCH2Q9Y6C5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
PTCH2Q9Y6C5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC22.32■■□□□ 1.16
PTCH2Q9Y6C5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCH2Q9Y6C5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
PTCH2Q9Y6C5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCH2Q9Y6C5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCH2Q9Y6C5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCH2Q9Y6C5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 ATP5G2P1-201ENST00000433580 426 ntBASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 TSPY17P-201ENST00000450329 467 ntBASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 AL512604.3-201ENST00000569583 964 ntBASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 KRT8P17-201ENST00000453110 1448 ntBASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCH2Q9Y6C5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.3■■□□□ 1.16
PTCH2Q9Y6C5 HLA-A-209ENST00000638375 975 ntBASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms