Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 AL390961.4-201ENST00000623958 2535 ntBASIC18.62■□□□□ 0.57
AP4S1Q9Y587 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.61■□□□□ 0.57
AP4S1Q9Y587 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 GUSBP5-201ENST00000418136 578 ntBASIC18.61■□□□□ 0.57
AP4S1Q9Y587 AC138907.5-202ENST00000569484 235 ntBASIC18.61■□□□□ 0.57
AP4S1Q9Y587 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.61■□□□□ 0.57
AP4S1Q9Y587 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
AP4S1Q9Y587 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 AC135050.7-201ENST00000624508 2218 ntBASIC18.59■□□□□ 0.57
AP4S1Q9Y587 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 AC018470.1-201ENST00000624790 3129 ntBASIC18.59■□□□□ 0.57
AP4S1Q9Y587 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP4S1Q9Y587 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
AP4S1Q9Y587 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.58■□□□□ 0.57
AP4S1Q9Y587 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.58■□□□□ 0.57
AP4S1Q9Y587 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.58■□□□□ 0.57
AP4S1Q9Y587 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP4S1Q9Y587 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP4S1Q9Y587 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP4S1Q9Y587 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 AC007322.3-201ENST00000426526 701 ntBASIC18.58■□□□□ 0.56
AP4S1Q9Y587 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.58■□□□□ 0.56
AP4S1Q9Y587 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms