Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP3Q9Y446 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.79■□□□□ 0.76
PKP3Q9Y446 AC116351.2-201ENST00000606540 1585 ntBASIC19.79■□□□□ 0.76
PKP3Q9Y446 AC009237.14-201ENST00000609975 1594 ntBASIC19.79■□□□□ 0.76
PKP3Q9Y446 AC124283.5-201ENST00000624661 1809 ntBASIC19.79■□□□□ 0.76
PKP3Q9Y446 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PKP3Q9Y446 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP3Q9Y446 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.79■□□□□ 0.76
PKP3Q9Y446 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PKP3Q9Y446 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP3Q9Y446 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP3Q9Y446 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PKP3Q9Y446 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PKP3Q9Y446 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP3Q9Y446 AC026366.1-201ENST00000488803 879 ntBASIC19.79■□□□□ 0.76
PKP3Q9Y446 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
PKP3Q9Y446 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PKP3Q9Y446 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.79■□□□□ 0.76
PKP3Q9Y446 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP3Q9Y446 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP3Q9Y446 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP3Q9Y446 AC018553.1-201ENST00000616682 1458 ntBASIC19.79■□□□□ 0.76
PKP3Q9Y446 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.79■□□□□ 0.76
PKP3Q9Y446 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP3Q9Y446 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP3Q9Y446 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP3Q9Y446 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PKP3Q9Y446 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PKP3Q9Y446 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP3Q9Y446 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.78■□□□□ 0.76
PKP3Q9Y446 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.78■□□□□ 0.76
PKP3Q9Y446 POM121L13P-201ENST00000422362 380 ntBASIC19.78■□□□□ 0.76
PKP3Q9Y446 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.78■□□□□ 0.76
PKP3Q9Y446 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PKP3Q9Y446 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.78■□□□□ 0.76
PKP3Q9Y446 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PKP3Q9Y446 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP3Q9Y446 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP3Q9Y446 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PKP3Q9Y446 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP3Q9Y446 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PKP3Q9Y446 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.78■□□□□ 0.76
PKP3Q9Y446 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP3Q9Y446 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
PKP3Q9Y446 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP3Q9Y446 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PKP3Q9Y446 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PKP3Q9Y446 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PKP3Q9Y446 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.77■□□□□ 0.76
PKP3Q9Y446 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP3Q9Y446 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP3Q9Y446 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
PKP3Q9Y446 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.77■□□□□ 0.76
PKP3Q9Y446 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP3Q9Y446 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.77■□□□□ 0.76
PKP3Q9Y446 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PKP3Q9Y446 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP3Q9Y446 KRT17P3-201ENST00000420566 1262 ntBASIC19.77■□□□□ 0.76
PKP3Q9Y446 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
PKP3Q9Y446 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PKP3Q9Y446 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PKP3Q9Y446 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP3Q9Y446 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.77■□□□□ 0.76
PKP3Q9Y446 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP3Q9Y446 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP3Q9Y446 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PKP3Q9Y446 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PKP3Q9Y446 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PKP3Q9Y446 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PKP3Q9Y446 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.76■□□□□ 0.75
PKP3Q9Y446 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.76■□□□□ 0.75
PKP3Q9Y446 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PKP3Q9Y446 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP3Q9Y446 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.76■□□□□ 0.75
PKP3Q9Y446 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PKP3Q9Y446 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP3Q9Y446 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP3Q9Y446 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP3Q9Y446 ESRRAP1-201ENST00000400596 1257 ntBASIC19.76■□□□□ 0.75
PKP3Q9Y446 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.76■□□□□ 0.75
PKP3Q9Y446 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.76■□□□□ 0.75
PKP3Q9Y446 AC008403.3-201ENST00000598924 454 ntBASIC19.76■□□□□ 0.75
PKP3Q9Y446 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.76■□□□□ 0.75
PKP3Q9Y446 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP3Q9Y446 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PKP3Q9Y446 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PKP3Q9Y446 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP3Q9Y446 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
PKP3Q9Y446 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.76■□□□□ 0.75
PKP3Q9Y446 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.76■□□□□ 0.75
PKP3Q9Y446 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.76■□□□□ 0.75
PKP3Q9Y446 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.75■□□□□ 0.75
PKP3Q9Y446 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKP3Q9Y446 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP3Q9Y446 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PKP3Q9Y446 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PKP3Q9Y446 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PKP3Q9Y446 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP3Q9Y446 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PKP3Q9Y446 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms