Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RTCBQ9Y3I0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RTCBQ9Y3I0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RTCBQ9Y3I0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RTCBQ9Y3I0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RTCBQ9Y3I0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
RTCBQ9Y3I0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC24.97■■□□□ 1.59
RTCBQ9Y3I0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC24.97■■□□□ 1.59
RTCBQ9Y3I0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC24.97■■□□□ 1.59
RTCBQ9Y3I0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.97■■□□□ 1.59
RTCBQ9Y3I0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RTCBQ9Y3I0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RTCBQ9Y3I0 FP700111.2-201ENST00000619190 1892 ntBASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 TPM4P1-201ENST00000436100 807 ntBASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTCBQ9Y3I0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RTCBQ9Y3I0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
RTCBQ9Y3I0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RTCBQ9Y3I0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC24.95■■□□□ 1.58
RTCBQ9Y3I0 PHGDH-210ENST00000641115 1638 ntBASIC24.95■■□□□ 1.58
RTCBQ9Y3I0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC24.95■■□□□ 1.58
RTCBQ9Y3I0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC24.95■■□□□ 1.58
RTCBQ9Y3I0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC24.95■■□□□ 1.58
RTCBQ9Y3I0 AL023803.3-201ENST00000615559 522 ntBASIC24.95■■□□□ 1.58
RTCBQ9Y3I0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC24.95■■□□□ 1.58
RTCBQ9Y3I0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RTCBQ9Y3I0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RTCBQ9Y3I0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 TSPY17P-201ENST00000450329 467 ntBASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 AL031432.5-201ENST00000641059 760 ntBASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RTCBQ9Y3I0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 IER3-202ENST00000376377 1350 ntBASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 HOMER2P1-201ENST00000455653 964 ntBASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
RTCBQ9Y3I0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
RTCBQ9Y3I0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTCBQ9Y3I0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTCBQ9Y3I0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTCBQ9Y3I0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTCBQ9Y3I0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC24.92■■□□□ 1.58
RTCBQ9Y3I0 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.92■■□□□ 1.58
RTCBQ9Y3I0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC24.92■■□□□ 1.58
RTCBQ9Y3I0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC24.92■■□□□ 1.58
RTCBQ9Y3I0 AL512604.3-201ENST00000569583 964 ntBASIC24.92■■□□□ 1.58
RTCBQ9Y3I0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTCBQ9Y3I0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
RTCBQ9Y3I0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms