Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
SATB2Q9UPW6 AC006128.1-201ENST00000624704 1661 ntBASIC19.27■□□□□ 0.67
SATB2Q9UPW6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SATB2Q9UPW6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.27■□□□□ 0.67
SATB2Q9UPW6 AC121338.2-201ENST00000622535 1744 ntBASIC19.26■□□□□ 0.67
SATB2Q9UPW6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SATB2Q9UPW6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SATB2Q9UPW6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SATB2Q9UPW6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
SATB2Q9UPW6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.26■□□□□ 0.67
SATB2Q9UPW6 MMP23A-201ENST00000234610 1017 ntBASIC19.26■□□□□ 0.67
SATB2Q9UPW6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SATB2Q9UPW6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SATB2Q9UPW6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.26■□□□□ 0.67
SATB2Q9UPW6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.26■□□□□ 0.67
SATB2Q9UPW6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.26■□□□□ 0.67
SATB2Q9UPW6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.26■□□□□ 0.67
SATB2Q9UPW6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SATB2Q9UPW6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 KRT16P5-201ENST00000455284 522 ntBASIC19.25■□□□□ 0.67
SATB2Q9UPW6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 AL121829.2-201ENST00000620908 328 ntBASIC19.25■□□□□ 0.67
SATB2Q9UPW6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SATB2Q9UPW6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 PLK5-205ENST00000642079 1969 ntBASIC19.24■□□□□ 0.67
SATB2Q9UPW6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 FAM197Y1-201ENST00000421178 764 ntBASIC19.24■□□□□ 0.67
SATB2Q9UPW6 AL353807.1-201ENST00000427475 662 ntBASIC19.24■□□□□ 0.67
SATB2Q9UPW6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SATB2Q9UPW6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 NBPF21P-201ENST00000425093 1451 ntBASIC19.23■□□□□ 0.67
SATB2Q9UPW6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 AC124283.5-201ENST00000624661 1809 ntBASIC19.23■□□□□ 0.67
SATB2Q9UPW6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SATB2Q9UPW6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.22■□□□□ 0.67
SATB2Q9UPW6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms