Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX6Q9UPM6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LHX6Q9UPM6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LHX6Q9UPM6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LHX6Q9UPM6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LHX6Q9UPM6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LHX6Q9UPM6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LHX6Q9UPM6 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC18.64■□□□□ 0.57
LHX6Q9UPM6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.64■□□□□ 0.57
LHX6Q9UPM6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LHX6Q9UPM6 AC005332.1-201ENST00000577698 1310 ntBASIC18.64■□□□□ 0.57
LHX6Q9UPM6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.64■□□□□ 0.57
LHX6Q9UPM6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.64■□□□□ 0.57
LHX6Q9UPM6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LHX6Q9UPM6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.64■□□□□ 0.57
LHX6Q9UPM6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LHX6Q9UPM6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LHX6Q9UPM6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 AC004870.1-201ENST00000315132 882 ntBASIC18.63■□□□□ 0.57
LHX6Q9UPM6 INGX-201ENST00000359239 846 ntBASIC18.63■□□□□ 0.57
LHX6Q9UPM6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.63■□□□□ 0.57
LHX6Q9UPM6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 AL022342.1-201ENST00000400363 863 ntBASIC18.63■□□□□ 0.57
LHX6Q9UPM6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX6Q9UPM6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 AL845331.1-201ENST00000424978 1190 ntBASIC18.62■□□□□ 0.57
LHX6Q9UPM6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 AL671277.2-201ENST00000458060 996 ntBASIC18.62■□□□□ 0.57
LHX6Q9UPM6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.62■□□□□ 0.57
LHX6Q9UPM6 AL138966.2-201ENST00000621997 464 ntBASIC18.62■□□□□ 0.57
LHX6Q9UPM6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 KRT8P45-201ENST00000414328 1447 ntBASIC18.62■□□□□ 0.57
LHX6Q9UPM6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LHX6Q9UPM6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 FSCN1P1-201ENST00000568912 1481 ntBASIC18.61■□□□□ 0.57
LHX6Q9UPM6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 PAX6-247ENST00000638965 979 ntTSL 5 BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 AL121603.2-201ENST00000557373 2117 ntBASIC18.61■□□□□ 0.57
LHX6Q9UPM6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LHX6Q9UPM6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LHX6Q9UPM6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms