Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGB4Q9UN71 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 AC013268.1-206ENST00000638368 961 ntBASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 AC112229.1-201ENST00000639295 961 ntBASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 AC087633.2-202ENST00000565166 1439 ntBASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGB4Q9UN71 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 AC137761.2-201ENST00000561729 223 ntBASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 AL162412.1-201ENST00000567129 965 ntBASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 AC145350.3-201ENST00000569033 163 ntBASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGB4Q9UN71 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 MIR6821-201ENST00000617625 74 ntBASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB4Q9UN71 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms