Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 C1QL1P1-201ENST00000568105 661 ntBASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 AC073195.1-201ENST00000607241 877 ntBASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 TSPY7P-201ENST00000431358 1114 ntBASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 TMEM179-206ENST00000616017 1645 ntBASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBQLN1Q9UMX0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 AC009237.14-201ENST00000609975 1594 ntBASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
UBQLN1Q9UMX0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 KRT17P2-201ENST00000300992 1314 ntBASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 NIFKP9-201ENST00000419265 221 ntBASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 MIR4785-201ENST00000585005 73 ntBASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBQLN1Q9UMX0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 CD177P1-201ENST00000606252 935 ntBASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.15■□□□□ 0.98
UBQLN1Q9UMX0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.14■□□□□ 0.98
UBQLN1Q9UMX0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms