Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.57■□□□□ 0.56
CTSFQ9UBX1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 MIR4785-201ENST00000585005 73 ntBASIC18.56■□□□□ 0.56
CTSFQ9UBX1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSFQ9UBX1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 FAM197Y1-201ENST00000421178 764 ntBASIC18.55■□□□□ 0.56
CTSFQ9UBX1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 AP002982.1-201ENST00000492365 877 ntBASIC18.55■□□□□ 0.56
CTSFQ9UBX1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 CD177P1-201ENST00000606252 935 ntBASIC18.55■□□□□ 0.56
CTSFQ9UBX1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTSFQ9UBX1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 GABARAPL3-202ENST00000624044 1851 ntBASIC18.54■□□□□ 0.56
CTSFQ9UBX1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 KRT17P2-201ENST00000300992 1314 ntBASIC18.54■□□□□ 0.56
CTSFQ9UBX1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 YBX1P10-201ENST00000444752 975 ntBASIC18.54■□□□□ 0.56
CTSFQ9UBX1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.54■□□□□ 0.56
CTSFQ9UBX1 AL157384.1-201ENST00000445995 2473 ntBASIC18.54■□□□□ 0.56
CTSFQ9UBX1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 TSPY15P-201ENST00000457163 923 ntBASIC18.53■□□□□ 0.56
CTSFQ9UBX1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 AC073195.1-201ENST00000607241 877 ntBASIC18.53■□□□□ 0.56
CTSFQ9UBX1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CTSFQ9UBX1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms