Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE7Q9UBL6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 KRT18P16-201ENST00000510337 1294 ntBASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 AC026471.5-201ENST00000615068 467 ntBASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE7Q9UBL6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 AL162377.1-201ENST00000618844 1793 ntBASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 NIFKP9-201ENST00000419265 221 ntBASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 TUBB8P6-201ENST00000436895 1288 ntBASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 AL355355.2-201ENST00000442321 338 ntBASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE7Q9UBL6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 KSR1P1-201ENST00000446298 240 ntBASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 AP003071.4-201ENST00000562276 1284 ntBASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 C1QL1P1-201ENST00000568105 661 ntBASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 AC073912.3-201ENST00000624414 853 ntBASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 AC092667.1-201ENST00000434301 2586 ntBASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE7Q9UBL6 AP001271.2-201ENST00000624018 1556 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms