Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 AC079598.2-202ENST00000546624 1451 ntBASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 AC105233.4-201ENST00000642045 216 ntBASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 AL133373.2-201ENST00000623187 2828 ntBASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 AC009237.14-201ENST00000609975 1594 ntBASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 BX842568.3-201ENST00000418104 571 ntBASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 PCDHB18P-201ENST00000524813 2368 ntBASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD3Q9UBI1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 AC126544.1-201ENST00000580842 1059 ntBASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.3■□□□□ 0.36
COMMD3Q9UBI1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD3Q9UBI1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD3Q9UBI1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD3Q9UBI1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
COMMD3Q9UBI1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD3Q9UBI1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD3Q9UBI1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD3Q9UBI1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COMMD3Q9UBI1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD3Q9UBI1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COMMD3Q9UBI1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.29■□□□□ 0.36
COMMD3Q9UBI1 IGHV3-19-201ENST00000521488 291 ntBASIC17.29■□□□□ 0.36
COMMD3Q9UBI1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms