Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.03■□□□□ 0.96
CHD7Q9P2D1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD7Q9P2D1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.02■□□□□ 0.96
CHD7Q9P2D1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHD7Q9P2D1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHD7Q9P2D1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CHD7Q9P2D1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD7Q9P2D1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.02■□□□□ 0.96
CHD7Q9P2D1 VENTXP5-201ENST00000523979 775 ntBASIC21.02■□□□□ 0.96
CHD7Q9P2D1 AL691432.3-201ENST00000621860 400 ntBASIC21.02■□□□□ 0.96
CHD7Q9P2D1 KRT8P20-201ENST00000423953 1409 ntBASIC21.02■□□□□ 0.96
CHD7Q9P2D1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CHD7Q9P2D1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
CHD7Q9P2D1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CHD7Q9P2D1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHD7Q9P2D1 AC010653.2-201ENST00000623505 997 ntBASIC21.02■□□□□ 0.96
CHD7Q9P2D1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
CHD7Q9P2D1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHD7Q9P2D1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
CHD7Q9P2D1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHD7Q9P2D1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHD7Q9P2D1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.01■□□□□ 0.95
CHD7Q9P2D1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.01■□□□□ 0.95
CHD7Q9P2D1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.01■□□□□ 0.95
CHD7Q9P2D1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.01■□□□□ 0.95
CHD7Q9P2D1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHD7Q9P2D1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD7Q9P2D1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHD7Q9P2D1 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.01■□□□□ 0.95
CHD7Q9P2D1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD7Q9P2D1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHD7Q9P2D1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD7Q9P2D1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHD7Q9P2D1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.01■□□□□ 0.95
CHD7Q9P2D1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
CHD7Q9P2D1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.01■□□□□ 0.95
CHD7Q9P2D1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD7Q9P2D1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21■□□□□ 0.95
CHD7Q9P2D1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21■□□□□ 0.95
CHD7Q9P2D1 YBX1P10-201ENST00000444752 975 ntBASIC21■□□□□ 0.95
CHD7Q9P2D1 Z85996.1-201ENST00000494644 937 ntBASIC21■□□□□ 0.95
CHD7Q9P2D1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
CHD7Q9P2D1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CHD7Q9P2D1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD7Q9P2D1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD7Q9P2D1 KRT18P16-201ENST00000510337 1294 ntBASIC21■□□□□ 0.95
CHD7Q9P2D1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD7Q9P2D1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21■□□□□ 0.95
CHD7Q9P2D1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21■□□□□ 0.95
CHD7Q9P2D1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21■□□□□ 0.95
CHD7Q9P2D1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21■□□□□ 0.95
CHD7Q9P2D1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21■□□□□ 0.95
CHD7Q9P2D1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD7Q9P2D1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21■□□□□ 0.95
CHD7Q9P2D1 AC116562.4-202ENST00000641738 218 ntBASIC21■□□□□ 0.95
CHD7Q9P2D1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.99■□□□□ 0.95
CHD7Q9P2D1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD7Q9P2D1 AF106564.1-201ENST00000607058 2553 ntBASIC20.99■□□□□ 0.95
CHD7Q9P2D1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD7Q9P2D1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD7Q9P2D1 KRT18P38-201ENST00000449496 1282 ntBASIC20.98■□□□□ 0.95
CHD7Q9P2D1 TFP1-202ENST00000475455 1573 ntBASIC20.98■□□□□ 0.95
CHD7Q9P2D1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD7Q9P2D1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD7Q9P2D1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
CHD7Q9P2D1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CHD7Q9P2D1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD7Q9P2D1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD7Q9P2D1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD7Q9P2D1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD7Q9P2D1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD7Q9P2D1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.98■□□□□ 0.95
CHD7Q9P2D1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD7Q9P2D1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms