Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 BCL2-203ENST00000589955 5011 ntBASIC19.05■□□□□ 0.64
NDE1Q9NXR1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 AC007322.3-201ENST00000426526 701 ntBASIC19.05■□□□□ 0.64
NDE1Q9NXR1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NDE1Q9NXR1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 AC018470.1-201ENST00000624790 3129 ntBASIC19.04■□□□□ 0.64
NDE1Q9NXR1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 PGM5P4-201ENST00000421970 445 ntBASIC19.04■□□□□ 0.64
NDE1Q9NXR1 AC131281.2-201ENST00000520478 145 ntBASIC19.04■□□□□ 0.64
NDE1Q9NXR1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NDE1Q9NXR1 AC020916.1-201ENST00000587762 1774 ntBASIC19.04■□□□□ 0.64
NDE1Q9NXR1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 AC079140.4-201ENST00000507448 529 ntBASIC19.03■□□□□ 0.64
NDE1Q9NXR1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 AC027682.1-201ENST00000562846 899 ntBASIC19.03■□□□□ 0.64
NDE1Q9NXR1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 AC008764.7-201ENST00000593779 1081 ntBASIC19.03■□□□□ 0.64
NDE1Q9NXR1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NDE1Q9NXR1 FZD10-202ENST00000539839 3282 ntBASIC19.03■□□□□ 0.64
NDE1Q9NXR1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 AL390961.4-201ENST00000623958 2535 ntBASIC19.02■□□□□ 0.64
NDE1Q9NXR1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 UNC93B3-201ENST00000308076 687 ntBASIC19.02■□□□□ 0.64
NDE1Q9NXR1 AC099791.1-201ENST00000416440 715 ntBASIC19.02■□□□□ 0.64
NDE1Q9NXR1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 AC012414.1-201ENST00000556676 535 ntBASIC19.02■□□□□ 0.64
NDE1Q9NXR1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NDE1Q9NXR1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.02■□□□□ 0.63
NDE1Q9NXR1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
NDE1Q9NXR1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.02■□□□□ 0.63
NDE1Q9NXR1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms