Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.27■□□□□ 0.52
HPF1Q9NWY4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.27■□□□□ 0.52
HPF1Q9NWY4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HPF1Q9NWY4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.27■□□□□ 0.52
HPF1Q9NWY4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.27■□□□□ 0.52
HPF1Q9NWY4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.27■□□□□ 0.52
HPF1Q9NWY4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.27■□□□□ 0.52
HPF1Q9NWY4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.27■□□□□ 0.52
HPF1Q9NWY4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HPF1Q9NWY4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HPF1Q9NWY4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.27■□□□□ 0.51
HPF1Q9NWY4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 NBPF21P-201ENST00000425093 1451 ntBASIC18.26■□□□□ 0.51
HPF1Q9NWY4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HPF1Q9NWY4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 AC020907.5-201ENST00000624372 1936 ntBASIC18.25■□□□□ 0.51
HPF1Q9NWY4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
HPF1Q9NWY4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.24■□□□□ 0.51
HPF1Q9NWY4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HPF1Q9NWY4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 AC004264.1-201ENST00000608354 794 ntBASIC18.23■□□□□ 0.51
HPF1Q9NWY4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPF1Q9NWY4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms