Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ECHDC1Q9NTX5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC24.06■■□□□ 1.44
ECHDC1Q9NTX5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ECHDC1Q9NTX5 AP006587.1-201ENST00000534129 1502 ntBASIC24.05■■□□□ 1.44
ECHDC1Q9NTX5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC24.05■■□□□ 1.44
ECHDC1Q9NTX5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.05■■□□□ 1.44
ECHDC1Q9NTX5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ECHDC1Q9NTX5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC24.05■■□□□ 1.44
ECHDC1Q9NTX5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
ECHDC1Q9NTX5 RN7SL471P-201ENST00000580476 299 ntBASIC24.05■■□□□ 1.44
ECHDC1Q9NTX5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ECHDC1Q9NTX5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
ECHDC1Q9NTX5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.05■■□□□ 1.44
ECHDC1Q9NTX5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
ECHDC1Q9NTX5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC24.05■■□□□ 1.44
ECHDC1Q9NTX5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ECHDC1Q9NTX5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC24.05■■□□□ 1.44
ECHDC1Q9NTX5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 PRKY-204ENST00000533551 1019 ntBASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 ITM2C-210ENST00000620962 501 ntBASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ECHDC1Q9NTX5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ECHDC1Q9NTX5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ECHDC1Q9NTX5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC24.03■■□□□ 1.44
ECHDC1Q9NTX5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
ECHDC1Q9NTX5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
ECHDC1Q9NTX5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ECHDC1Q9NTX5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ECHDC1Q9NTX5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC24.03■■□□□ 1.44
ECHDC1Q9NTX5 ABHD17AP1-201ENST00000358206 933 ntBASIC24.03■■□□□ 1.44
ECHDC1Q9NTX5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
ECHDC1Q9NTX5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC24.03■■□□□ 1.44
ECHDC1Q9NTX5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
ECHDC1Q9NTX5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ECHDC1Q9NTX5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC24.03■■□□□ 1.44
ECHDC1Q9NTX5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 AL023875.1-201ENST00000640777 796 ntBASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.02■■□□□ 1.44
ECHDC1Q9NTX5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 KRT18P29-201ENST00000397031 1267 ntBASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 YBX1P10-201ENST00000444752 975 ntBASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 TREX1-205ENST00000625293 1783 ntBASIC24.01■■□□□ 1.43
ECHDC1Q9NTX5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24■■□□□ 1.43
ECHDC1Q9NTX5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC24■■□□□ 1.43
ECHDC1Q9NTX5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24■■□□□ 1.43
ECHDC1Q9NTX5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ECHDC1Q9NTX5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms