Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CDC42SE1Q9NRR8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 AD000864.1-201ENST00000624076 2295 ntBASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 OVCH1-AS1-204ENST00000641955 5529 ntBASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CDC42SE1Q9NRR8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42SE1Q9NRR8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC10.15□□□□□ -0.79
CDC42SE1Q9NRR8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
CDC42SE1Q9NRR8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
CDC42SE1Q9NRR8 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
CDC42SE1Q9NRR8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
CDC42SE1Q9NRR8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
CDC42SE1Q9NRR8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CDC42SE1Q9NRR8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
CDC42SE1Q9NRR8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CDC42SE1Q9NRR8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CDC42SE1Q9NRR8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms