Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF4Q9NR80 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.67■□□□□ 0.9
ARHGEF4Q9NR80 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.67■□□□□ 0.9
ARHGEF4Q9NR80 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.67■□□□□ 0.9
ARHGEF4Q9NR80 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.67■□□□□ 0.9
ARHGEF4Q9NR80 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.67■□□□□ 0.9
ARHGEF4Q9NR80 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF4Q9NR80 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF4Q9NR80 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF4Q9NR80 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.67■□□□□ 0.9
ARHGEF4Q9NR80 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 AC110285.5-201ENST00000611501 352 ntBASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 KRT8P20-201ENST00000423953 1409 ntBASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF4Q9NR80 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 AC012618.2-201ENST00000428058 849 ntBASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 AC023632.3-201ENST00000521633 145 ntBASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF4Q9NR80 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.64■□□□□ 0.9
ARHGEF4Q9NR80 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
ARHGEF4Q9NR80 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 RPS2P55-201ENST00000397318 883 ntBASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 AC107956.1-201ENST00000494359 873 ntBASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 AC233702.5-201ENST00000584107 538 ntBASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.64■□□□□ 0.89
ARHGEF4Q9NR80 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 PRKY-204ENST00000533551 1019 ntBASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF4Q9NR80 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms