Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 PTBP1P-201ENST00000554374 1601 ntBASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 SOX15-203ENST00000570788 1093 ntBASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 AC005829.2-201ENST00000571422 1056 ntBASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 AC006557.6-201ENST00000623071 864 ntBASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 AC098818.2-201ENST00000564925 2320 ntBASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 AC020907.5-201ENST00000624372 1936 ntBASIC18.86■□□□□ 0.61
NECTIN3Q9NQS3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 AC008403.3-201ENST00000598924 454 ntBASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NECTIN3Q9NQS3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 ABHD17AP1-201ENST00000358206 933 ntBASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 ESRRAP1-201ENST00000400596 1257 ntBASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 POU5F1P3-201ENST00000428824 1078 ntBASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 UNC93B4-201ENST00000505679 747 ntBASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 AC023632.3-201ENST00000521633 145 ntBASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.84■□□□□ 0.61
NECTIN3Q9NQS3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NECTIN3Q9NQS3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NECTIN3Q9NQS3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NECTIN3Q9NQS3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NECTIN3Q9NQS3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NECTIN3Q9NQS3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms