Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4BQ9NPR2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
SEMA4BQ9NPR2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4BQ9NPR2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4BQ9NPR2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.26■□□□□ 0.67
SEMA4BQ9NPR2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.26■□□□□ 0.67
SEMA4BQ9NPR2 AC023632.3-201ENST00000521633 145 ntBASIC19.26■□□□□ 0.67
SEMA4BQ9NPR2 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.26■□□□□ 0.67
SEMA4BQ9NPR2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SEMA4BQ9NPR2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.26■□□□□ 0.67
SEMA4BQ9NPR2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4BQ9NPR2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4BQ9NPR2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
SEMA4BQ9NPR2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SEMA4BQ9NPR2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 AC120498.9-201ENST00000339021 3867 ntBASIC19.25■□□□□ 0.67
SEMA4BQ9NPR2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 AC018445.3-201ENST00000624177 1945 ntBASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 ID1-201ENST00000376105 1233 ntBASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 AC133552.2-202ENST00000575694 574 ntBASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 AC098818.2-201ENST00000564925 2320 ntBASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
SEMA4BQ9NPR2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 AL050303.2-201ENST00000619798 666 ntBASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA4BQ9NPR2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA4BQ9NPR2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SEMA4BQ9NPR2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA4BQ9NPR2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SEMA4BQ9NPR2 MKRN4P-201ENST00000444706 1521 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms