Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 AC138907.5-202ENST00000569484 235 ntBASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM55Q9BYV6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM55Q9BYV6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM55Q9BYV6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM55Q9BYV6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TRIM55Q9BYV6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM55Q9BYV6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM55Q9BYV6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM55Q9BYV6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM55Q9BYV6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM55Q9BYV6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.83■□□□□ 0.77
TRIM55Q9BYV6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM55Q9BYV6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.83■□□□□ 0.76
TRIM55Q9BYV6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM55Q9BYV6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.83■□□□□ 0.76
TRIM55Q9BYV6 AC093503.3-201ENST00000624917 2352 ntBASIC19.83■□□□□ 0.76
TRIM55Q9BYV6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 DPP3P2-201ENST00000416030 1696 ntBASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 POU5F1P4-201ENST00000413175 1085 ntBASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 AC133552.2-202ENST00000575694 574 ntBASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 BX119927.1-201ENST00000636596 1552 ntBASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM55Q9BYV6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 KRT18P20-201ENST00000548986 1279 ntBASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 AC008175.2-201ENST00000612840 297 ntBASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 AC133041.1-202ENST00000642053 222 ntBASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRIM55Q9BYV6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRIM55Q9BYV6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms