Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.06■■□□□ 1.44
RTFDC1Q9BY42 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.06■■□□□ 1.44
RTFDC1Q9BY42 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 AC006128.1-201ENST00000624704 1661 ntBASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 FP700111.2-201ENST00000619190 1892 ntBASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 RNF152P1-201ENST00000397754 604 ntBASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 AC004951.3-201ENST00000418645 1148 ntBASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 UPK3BP1-201ENST00000428678 509 ntBASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 AC139887.4-201ENST00000607877 719 ntBASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 AC116562.4-202ENST00000641738 218 ntBASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTFDC1Q9BY42 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 HIST1H2APS4-201ENST00000362070 348 ntBASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 SLC25A1P2-201ENST00000430693 912 ntBASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.04■■□□□ 1.44
RTFDC1Q9BY42 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 MFAP1P1-201ENST00000442257 1255 ntBASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 CLN6-204ENST00000564752 900 ntTSL 3 BASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 CYGB-204ENST00000589342 815 ntTSL 3 BASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 AC010653.2-201ENST00000623505 997 ntBASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.03■■□□□ 1.44
RTFDC1Q9BY42 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 NMU-205ENST00000511469 756 ntTSL 3 BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC24.02■■□□□ 1.44
RTFDC1Q9BY42 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RTFDC1Q9BY42 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTFDC1Q9BY42 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
RTFDC1Q9BY42 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTFDC1Q9BY42 AC007663.1-201ENST00000438948 1240 ntBASIC24.01■■□□□ 1.43
RTFDC1Q9BY42 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC24.01■■□□□ 1.43
RTFDC1Q9BY42 CCR12P-201ENST00000446203 998 ntBASIC24.01■■□□□ 1.43
RTFDC1Q9BY42 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
RTFDC1Q9BY42 YBX1P2-201ENST00000489612 999 ntBASIC24.01■■□□□ 1.43
RTFDC1Q9BY42 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RTFDC1Q9BY42 PHGDH-210ENST00000641115 1638 ntBASIC24.01■■□□□ 1.43
RTFDC1Q9BY42 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RTFDC1Q9BY42 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
RTFDC1Q9BY42 AC092338.2-201ENST00000568827 1415 ntBASIC24.01■■□□□ 1.43
RTFDC1Q9BY42 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTFDC1Q9BY42 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24■■□□□ 1.43
RTFDC1Q9BY42 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
RTFDC1Q9BY42 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24■■□□□ 1.43
RTFDC1Q9BY42 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms