Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 POLD2P1-201ENST00000511220 997 ntBASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRFN3Q9BTN0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 CA15P1-201ENST00000481698 905 ntBASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 FOSL1P1-201ENST00000511041 816 ntBASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRFN3Q9BTN0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 PMS2P7-201ENST00000506558 1336 ntBASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 RASA4DP-201ENST00000460726 1199 ntBASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 NEK4P2-201ENST00000580004 1012 ntBASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 AC140113.2-201ENST00000604370 208 ntBASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
LRFN3Q9BTN0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN3Q9BTN0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
LRFN3Q9BTN0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.78■□□□□ 0.76
LRFN3Q9BTN0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN3Q9BTN0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN3Q9BTN0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN3Q9BTN0 KRT16P4-201ENST00000453883 522 ntBASIC19.78■□□□□ 0.76
LRFN3Q9BTN0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN3Q9BTN0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN3Q9BTN0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN3Q9BTN0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.78■□□□□ 0.76
LRFN3Q9BTN0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN3Q9BTN0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.78■□□□□ 0.76
LRFN3Q9BTN0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN3Q9BTN0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN3Q9BTN0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN3Q9BTN0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms