Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.09■□□□□ 0.97
PAAF1Q9BRP4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.09■□□□□ 0.97
PAAF1Q9BRP4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PAAF1Q9BRP4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PAAF1Q9BRP4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PAAF1Q9BRP4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PAAF1Q9BRP4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PAAF1Q9BRP4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PAAF1Q9BRP4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PAAF1Q9BRP4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PAAF1Q9BRP4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PAAF1Q9BRP4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PAAF1Q9BRP4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.08■□□□□ 0.97
PAAF1Q9BRP4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.08■□□□□ 0.97
PAAF1Q9BRP4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PAAF1Q9BRP4 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.08■□□□□ 0.97
PAAF1Q9BRP4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
PAAF1Q9BRP4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PAAF1Q9BRP4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.08■□□□□ 0.97
PAAF1Q9BRP4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.08■□□□□ 0.97
PAAF1Q9BRP4 AL445675.2-201ENST00000620291 557 ntBASIC21.08■□□□□ 0.97
PAAF1Q9BRP4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PAAF1Q9BRP4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PAAF1Q9BRP4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PAAF1Q9BRP4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PAAF1Q9BRP4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PAAF1Q9BRP4 CYP2D8P-201ENST00000433633 1490 ntBASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 AL691432.2-201ENST00000607222 2038 ntBASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 RCN1P1-201ENST00000400413 996 ntBASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 MIR6786-201ENST00000616843 113 ntBASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 TMEM179-206ENST00000616017 1645 ntBASIC21.07■□□□□ 0.96
PAAF1Q9BRP4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 AC004980.1-204ENST00000429707 299 ntBASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 AL031985.4-201ENST00000642138 673 ntBASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PAAF1Q9BRP4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PAAF1Q9BRP4 AL162377.1-201ENST00000618844 1793 ntBASIC21.05■□□□□ 0.96
PAAF1Q9BRP4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.05■□□□□ 0.96
PAAF1Q9BRP4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PAAF1Q9BRP4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PAAF1Q9BRP4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PAAF1Q9BRP4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PAAF1Q9BRP4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.05■□□□□ 0.96
PAAF1Q9BRP4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
PAAF1Q9BRP4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PAAF1Q9BRP4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.05■□□□□ 0.96
PAAF1Q9BRP4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PAAF1Q9BRP4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PAAF1Q9BRP4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PAAF1Q9BRP4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
PAAF1Q9BRP4 AC011506.1-201ENST00000474329 610 ntBASIC21.04■□□□□ 0.96
PAAF1Q9BRP4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.04■□□□□ 0.96
PAAF1Q9BRP4 HLA-A-209ENST00000638375 975 ntBASIC21.04■□□□□ 0.96
PAAF1Q9BRP4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PAAF1Q9BRP4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PAAF1Q9BRP4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PAAF1Q9BRP4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.04■□□□□ 0.96
PAAF1Q9BRP4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PAAF1Q9BRP4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PAAF1Q9BRP4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.03■□□□□ 0.96
PAAF1Q9BRP4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PAAF1Q9BRP4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.03■□□□□ 0.96
PAAF1Q9BRP4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PAAF1Q9BRP4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.03■□□□□ 0.96
PAAF1Q9BRP4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PAAF1Q9BRP4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.03■□□□□ 0.96
PAAF1Q9BRP4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PAAF1Q9BRP4 FITM1-202ENST00000559294 800 ntBASIC21.03■□□□□ 0.96
PAAF1Q9BRP4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.03■□□□□ 0.96
PAAF1Q9BRP4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.03■□□□□ 0.96
PAAF1Q9BRP4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.03■□□□□ 0.96
PAAF1Q9BRP4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.03■□□□□ 0.96
PAAF1Q9BRP4 AL157384.1-201ENST00000445995 2473 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms