Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC011558.1-201ENST00000623459 338 ntBASIC16.63■□□□□ 0.25
FOXC2Q99958 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXC2Q99958 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.63■□□□□ 0.25
FOXC2Q99958 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXC2Q99958 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXC2Q99958 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
FOXC2Q99958 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
FOXC2Q99958 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXC2Q99958 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXC2Q99958 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXC2Q99958 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXC2Q99958 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXC2Q99958 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXC2Q99958 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXC2Q99958 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXC2Q99958 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXC2Q99958 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXC2Q99958 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXC2Q99958 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.62■□□□□ 0.25
FOXC2Q99958 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXC2Q99958 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXC2Q99958 AL671277.2-201ENST00000458060 996 ntBASIC16.62■□□□□ 0.25
FOXC2Q99958 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.62■□□□□ 0.25
FOXC2Q99958 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXC2Q99958 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXC2Q99958 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.62■□□□□ 0.25
FOXC2Q99958 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXC2Q99958 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.62■□□□□ 0.25
FOXC2Q99958 AC116407.4-201ENST00000623319 1061 ntBASIC16.62■□□□□ 0.25
FOXC2Q99958 MIR2861-201ENST00000636310 90 ntBASIC16.62■□□□□ 0.25
FOXC2Q99958 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXC2Q99958 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXC2Q99958 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
FOXC2Q99958 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXC2Q99958 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXC2Q99958 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXC2Q99958 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
FOXC2Q99958 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXC2Q99958 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXC2Q99958 KRT8P20-201ENST00000423953 1409 ntBASIC16.62■□□□□ 0.25
FOXC2Q99958 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXC2Q99958 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXC2Q99958 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXC2Q99958 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXC2Q99958 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXC2Q99958 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXC2Q99958 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FOXC2Q99958 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
FOXC2Q99958 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXC2Q99958 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
FOXC2Q99958 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
FOXC2Q99958 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXC2Q99958 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXC2Q99958 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.61■□□□□ 0.25
FOXC2Q99958 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXC2Q99958 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXC2Q99958 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXC2Q99958 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
FOXC2Q99958 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
FOXC2Q99958 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXC2Q99958 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXC2Q99958 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
FOXC2Q99958 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXC2Q99958 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FOXC2Q99958 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXC2Q99958 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
FOXC2Q99958 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXC2Q99958 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXC2Q99958 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.6■□□□□ 0.25
FOXC2Q99958 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXC2Q99958 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXC2Q99958 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXC2Q99958 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXC2Q99958 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXC2Q99958 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXC2Q99958 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.6■□□□□ 0.25
FOXC2Q99958 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXC2Q99958 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.6■□□□□ 0.25
FOXC2Q99958 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
FOXC2Q99958 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXC2Q99958 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXC2Q99958 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXC2Q99958 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.6■□□□□ 0.25
FOXC2Q99958 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
FOXC2Q99958 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXC2Q99958 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
FOXC2Q99958 AC005332.1-201ENST00000577698 1310 ntBASIC16.6■□□□□ 0.25
FOXC2Q99958 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXC2Q99958 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
FOXC2Q99958 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXC2Q99958 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXC2Q99958 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXC2Q99958 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXC2Q99958 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.59■□□□□ 0.25
FOXC2Q99958 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXC2Q99958 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXC2Q99958 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.59■□□□□ 0.25
FOXC2Q99958 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXC2Q99958 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXC2Q99958 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms