Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.7■□□□□ 0.74
CPNE1Q99829 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CPNE1Q99829 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE1Q99829 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.7■□□□□ 0.74
CPNE1Q99829 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE1Q99829 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE1Q99829 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CPNE1Q99829 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE1Q99829 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.7■□□□□ 0.74
CPNE1Q99829 AL162430.1-201ENST00000480705 870 ntBASIC19.7■□□□□ 0.74
CPNE1Q99829 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.7■□□□□ 0.74
CPNE1Q99829 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.7■□□□□ 0.74
CPNE1Q99829 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE1Q99829 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.7■□□□□ 0.74
CPNE1Q99829 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE1Q99829 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE1Q99829 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE1Q99829 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE1Q99829 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE1Q99829 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.69■□□□□ 0.74
CPNE1Q99829 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CPNE1Q99829 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE1Q99829 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE1Q99829 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.69■□□□□ 0.74
CPNE1Q99829 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE1Q99829 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CPNE1Q99829 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.69■□□□□ 0.74
CPNE1Q99829 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE1Q99829 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.69■□□□□ 0.74
CPNE1Q99829 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE1Q99829 AC005181.1-201ENST00000604782 1256 ntBASIC19.69■□□□□ 0.74
CPNE1Q99829 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
CPNE1Q99829 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.69■□□□□ 0.74
CPNE1Q99829 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE1Q99829 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CPNE1Q99829 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE1Q99829 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE1Q99829 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE1Q99829 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.69■□□□□ 0.74
CPNE1Q99829 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.69■□□□□ 0.74
CPNE1Q99829 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CPNE1Q99829 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.69■□□□□ 0.74
CPNE1Q99829 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE1Q99829 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE1Q99829 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CPNE1Q99829 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CPNE1Q99829 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE1Q99829 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CPNE1Q99829 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CPNE1Q99829 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.68■□□□□ 0.74
CPNE1Q99829 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.68■□□□□ 0.74
CPNE1Q99829 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE1Q99829 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.68■□□□□ 0.74
CPNE1Q99829 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CPNE1Q99829 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE1Q99829 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CPNE1Q99829 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE1Q99829 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CPNE1Q99829 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE1Q99829 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE1Q99829 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE1Q99829 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE1Q99829 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE1Q99829 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CPNE1Q99829 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.67■□□□□ 0.74
CPNE1Q99829 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE1Q99829 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE1Q99829 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CPNE1Q99829 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.67■□□□□ 0.74
CPNE1Q99829 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE1Q99829 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE1Q99829 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CPNE1Q99829 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.67■□□□□ 0.74
CPNE1Q99829 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE1Q99829 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.67■□□□□ 0.74
CPNE1Q99829 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CPNE1Q99829 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE1Q99829 LSM12P1-201ENST00000411836 588 ntBASIC19.67■□□□□ 0.74
CPNE1Q99829 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE1Q99829 MIR5787-201ENST00000611784 55 ntBASIC19.67■□□□□ 0.74
CPNE1Q99829 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.67■□□□□ 0.74
CPNE1Q99829 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE1Q99829 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CPNE1Q99829 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.67■□□□□ 0.74
CPNE1Q99829 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CPNE1Q99829 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE1Q99829 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.66■□□□□ 0.74
CPNE1Q99829 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.66■□□□□ 0.74
CPNE1Q99829 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CPNE1Q99829 RNF165-205ENST00000588679 2904 ntBASIC19.66■□□□□ 0.74
CPNE1Q99829 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.66■□□□□ 0.74
CPNE1Q99829 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CPNE1Q99829 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE1Q99829 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.66■□□□□ 0.74
CPNE1Q99829 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE1Q99829 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE1Q99829 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.66■□□□□ 0.74
CPNE1Q99829 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.66■□□□□ 0.74
CPNE1Q99829 AC133552.2-202ENST00000575694 574 ntBASIC19.66■□□□□ 0.74
CPNE1Q99829 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms