Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 MKRN4P-201ENST00000444706 1521 ntBASIC19.25■□□□□ 0.67
NPAS2Q99743 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.25■□□□□ 0.67
NPAS2Q99743 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS2Q99743 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS2Q99743 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
NPAS2Q99743 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NPAS2Q99743 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS2Q99743 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.25■□□□□ 0.67
NPAS2Q99743 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS2Q99743 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS2Q99743 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS2Q99743 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS2Q99743 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.25■□□□□ 0.67
NPAS2Q99743 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.25■□□□□ 0.67
NPAS2Q99743 AC069236.1-201ENST00000604339 616 ntBASIC19.25■□□□□ 0.67
NPAS2Q99743 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS2Q99743 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS2Q99743 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS2Q99743 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS2Q99743 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.25■□□□□ 0.67
NPAS2Q99743 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS2Q99743 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.25■□□□□ 0.67
NPAS2Q99743 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NPAS2Q99743 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS2Q99743 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS2Q99743 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NPAS2Q99743 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS2Q99743 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NPAS2Q99743 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS2Q99743 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.24■□□□□ 0.67
NPAS2Q99743 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.24■□□□□ 0.67
NPAS2Q99743 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS2Q99743 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NPAS2Q99743 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS2Q99743 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS2Q99743 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.24■□□□□ 0.67
NPAS2Q99743 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NPAS2Q99743 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.24■□□□□ 0.67
NPAS2Q99743 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NPAS2Q99743 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.24■□□□□ 0.67
NPAS2Q99743 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.24■□□□□ 0.67
NPAS2Q99743 RARRES2P4-201ENST00000514074 484 ntBASIC19.24■□□□□ 0.67
NPAS2Q99743 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS2Q99743 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.24■□□□□ 0.67
NPAS2Q99743 AC008694.1-202ENST00000636953 945 ntBASIC19.24■□□□□ 0.67
NPAS2Q99743 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS2Q99743 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS2Q99743 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.24■□□□□ 0.67
NPAS2Q99743 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS2Q99743 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS2Q99743 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NPAS2Q99743 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS2Q99743 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS2Q99743 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NPAS2Q99743 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NPAS2Q99743 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS2Q99743 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NPAS2Q99743 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS2Q99743 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS2Q99743 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NPAS2Q99743 AC073210.2-201ENST00000430369 194 ntBASIC19.23■□□□□ 0.67
NPAS2Q99743 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.23■□□□□ 0.67
NPAS2Q99743 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NPAS2Q99743 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS2Q99743 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS2Q99743 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.23■□□□□ 0.67
NPAS2Q99743 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NPAS2Q99743 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS2Q99743 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS2Q99743 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.23■□□□□ 0.67
NPAS2Q99743 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS2Q99743 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.23■□□□□ 0.67
NPAS2Q99743 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NPAS2Q99743 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS2Q99743 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
NPAS2Q99743 AC120498.9-201ENST00000339021 3867 ntBASIC19.23■□□□□ 0.67
NPAS2Q99743 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS2Q99743 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
NPAS2Q99743 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.22■□□□□ 0.67
NPAS2Q99743 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS2Q99743 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS2Q99743 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.22■□□□□ 0.67
NPAS2Q99743 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.22■□□□□ 0.67
NPAS2Q99743 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NPAS2Q99743 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS2Q99743 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS2Q99743 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS2Q99743 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NPAS2Q99743 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.22■□□□□ 0.67
NPAS2Q99743 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
NPAS2Q99743 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.22■□□□□ 0.67
NPAS2Q99743 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS2Q99743 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NPAS2Q99743 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS2Q99743 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS2Q99743 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.22■□□□□ 0.67
NPAS2Q99743 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.22■□□□□ 0.67
NPAS2Q99743 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS2Q99743 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.22■□□□□ 0.67
NPAS2Q99743 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms