Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC128676.1-201ENST00000454392 318 ntBASIC17.96■□□□□ 0.47
NPAS1Q99742 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.96■□□□□ 0.47
NPAS1Q99742 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.96■□□□□ 0.47
NPAS1Q99742 AC069544.1-201ENST00000609399 999 ntBASIC17.96■□□□□ 0.47
NPAS1Q99742 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.96■□□□□ 0.47
NPAS1Q99742 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS1Q99742 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.96■□□□□ 0.47
NPAS1Q99742 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.96■□□□□ 0.47
NPAS1Q99742 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS1Q99742 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
NPAS1Q99742 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NPAS1Q99742 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS1Q99742 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS1Q99742 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS1Q99742 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS1Q99742 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS1Q99742 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS1Q99742 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS1Q99742 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NPAS1Q99742 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
NPAS1Q99742 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NPAS1Q99742 AL020996.1-203ENST00000536896 2307 ntBASIC17.95■□□□□ 0.46
NPAS1Q99742 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS1Q99742 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 PHGDH-210ENST00000641115 1638 ntBASIC17.95■□□□□ 0.46
NPAS1Q99742 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 FAM201B-201ENST00000458407 597 ntBASIC17.95■□□□□ 0.46
NPAS1Q99742 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.95■□□□□ 0.46
NPAS1Q99742 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.95■□□□□ 0.46
NPAS1Q99742 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 AC125437.2-201ENST00000625180 2167 ntBASIC17.95■□□□□ 0.46
NPAS1Q99742 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS1Q99742 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS1Q99742 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS1Q99742 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS1Q99742 AC018553.1-201ENST00000616682 1458 ntBASIC17.95■□□□□ 0.46
NPAS1Q99742 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.94■□□□□ 0.46
NPAS1Q99742 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS1Q99742 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.94■□□□□ 0.46
NPAS1Q99742 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS1Q99742 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.94■□□□□ 0.46
NPAS1Q99742 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS1Q99742 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS1Q99742 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NPAS1Q99742 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NPAS1Q99742 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
NPAS1Q99742 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
NPAS1Q99742 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS1Q99742 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.94■□□□□ 0.46
NPAS1Q99742 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS1Q99742 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS1Q99742 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS1Q99742 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.94■□□□□ 0.46
NPAS1Q99742 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
NPAS1Q99742 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
NPAS1Q99742 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.94■□□□□ 0.46
NPAS1Q99742 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.94■□□□□ 0.46
NPAS1Q99742 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS1Q99742 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.94■□□□□ 0.46
NPAS1Q99742 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.94■□□□□ 0.46
NPAS1Q99742 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NPAS1Q99742 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NPAS1Q99742 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.93■□□□□ 0.46
NPAS1Q99742 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS1Q99742 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS1Q99742 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.93■□□□□ 0.46
NPAS1Q99742 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS1Q99742 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.93■□□□□ 0.46
NPAS1Q99742 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS1Q99742 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS1Q99742 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS1Q99742 PRORSD1P-201ENST00000295112 541 ntBASIC17.93■□□□□ 0.46
NPAS1Q99742 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS1Q99742 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS1Q99742 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.93■□□□□ 0.46
NPAS1Q99742 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.93■□□□□ 0.46
NPAS1Q99742 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.93■□□□□ 0.46
NPAS1Q99742 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.93■□□□□ 0.46
NPAS1Q99742 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS1Q99742 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.93■□□□□ 0.46
NPAS1Q99742 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS1Q99742 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NPAS1Q99742 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS1Q99742 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS1Q99742 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS1Q99742 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS1Q99742 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms