Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCNX1Q96RV3 DGCR10-201ENST00000609839 495 ntBASIC17.4■□□□□ 0.38
PCNX1Q96RV3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.4■□□□□ 0.38
PCNX1Q96RV3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCNX1Q96RV3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.4■□□□□ 0.38
PCNX1Q96RV3 LINC00565-201ENST00000562710 2331 ntBASIC17.4■□□□□ 0.38
PCNX1Q96RV3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCNX1Q96RV3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCNX1Q96RV3 AC006128.1-201ENST00000624704 1661 ntBASIC17.4■□□□□ 0.38
PCNX1Q96RV3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCNX1Q96RV3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCNX1Q96RV3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.4■□□□□ 0.38
PCNX1Q96RV3 ATP5G1P1-201ENST00000448724 379 ntBASIC17.39■□□□□ 0.38
PCNX1Q96RV3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.39■□□□□ 0.38
PCNX1Q96RV3 AC006011.2-201ENST00000621313 1158 ntBASIC17.39■□□□□ 0.38
PCNX1Q96RV3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCNX1Q96RV3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCNX1Q96RV3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCNX1Q96RV3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCNX1Q96RV3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCNX1Q96RV3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCNX1Q96RV3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCNX1Q96RV3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.39■□□□□ 0.37
PCNX1Q96RV3 AL031133.1-201ENST00000406807 723 ntBASIC17.39■□□□□ 0.37
PCNX1Q96RV3 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.39■□□□□ 0.37
PCNX1Q96RV3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.39■□□□□ 0.37
PCNX1Q96RV3 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.39■□□□□ 0.37
PCNX1Q96RV3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCNX1Q96RV3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCNX1Q96RV3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCNX1Q96RV3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.39■□□□□ 0.37
PCNX1Q96RV3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 INGX-201ENST00000359239 846 ntBASIC17.38■□□□□ 0.37
PCNX1Q96RV3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 AC117947.1-201ENST00000427448 529 ntBASIC17.38■□□□□ 0.37
PCNX1Q96RV3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 ECEL1P1-201ENST00000373592 1742 ntBASIC17.38■□□□□ 0.37
PCNX1Q96RV3 AC121338.2-201ENST00000622535 1744 ntBASIC17.38■□□□□ 0.37
PCNX1Q96RV3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 AC091076.1-201ENST00000610741 619 ntBASIC17.38■□□□□ 0.37
PCNX1Q96RV3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCNX1Q96RV3 TSPY14P-201ENST00000303979 915 ntBASIC17.37■□□□□ 0.37
PCNX1Q96RV3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 LINC01238-205ENST00000567549 1107 ntBASIC17.37■□□□□ 0.37
PCNX1Q96RV3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 TFP1-202ENST00000475455 1573 ntBASIC17.37■□□□□ 0.37
PCNX1Q96RV3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCNX1Q96RV3 SMG8-203ENST00000578922 2178 ntBASIC17.37■□□□□ 0.37
PCNX1Q96RV3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 PKD1P6-201ENST00000343738 4769 ntBASIC17.36■□□□□ 0.37
PCNX1Q96RV3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 AL121894.2-201ENST00000602977 491 ntBASIC17.36■□□□□ 0.37
PCNX1Q96RV3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms