Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PCDH15Q96QU1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH15Q96QU1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH15Q96QU1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH15Q96QU1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH15Q96QU1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PCDH15Q96QU1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH15Q96QU1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH15Q96QU1 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.3■□□□□ 0.68
PCDH15Q96QU1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH15Q96QU1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH15Q96QU1 AP000550.4-202ENST00000639755 178 ntBASIC19.3■□□□□ 0.68
PCDH15Q96QU1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.29■□□□□ 0.68
PCDH15Q96QU1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 AC007663.1-201ENST00000438948 1240 ntBASIC19.29■□□□□ 0.68
PCDH15Q96QU1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 AC131212.4-201ENST00000623606 975 ntBASIC19.29■□□□□ 0.68
PCDH15Q96QU1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH15Q96QU1 AC018553.1-201ENST00000616682 1458 ntBASIC19.29■□□□□ 0.68
PCDH15Q96QU1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 AP000692.2-201ENST00000608391 879 ntBASIC19.28■□□□□ 0.68
PCDH15Q96QU1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 TUBB8P6-201ENST00000436895 1288 ntBASIC19.28■□□□□ 0.68
PCDH15Q96QU1 MFAP1P1-201ENST00000442257 1255 ntBASIC19.28■□□□□ 0.68
PCDH15Q96QU1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 SLC25A1P4-201ENST00000567977 778 ntBASIC19.28■□□□□ 0.68
PCDH15Q96QU1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
PCDH15Q96QU1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PCDH15Q96QU1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH15Q96QU1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH15Q96QU1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH15Q96QU1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH15Q96QU1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
PCDH15Q96QU1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH15Q96QU1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH15Q96QU1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH15Q96QU1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDH15Q96QU1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.27■□□□□ 0.67
PCDH15Q96QU1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 AC009947.2-201ENST00000444014 672 ntBASIC19.26■□□□□ 0.67
PCDH15Q96QU1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 AC011298.2-201ENST00000617989 482 ntBASIC19.26■□□□□ 0.67
PCDH15Q96QU1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH15Q96QU1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH15Q96QU1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms