Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 EMBP1-201ENST00000458200 901 ntBASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 NPAP1P7-201ENST00000613027 823 ntBASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 AC096733.2-201ENST00000609937 1394 ntBASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 AL022342.1-201ENST00000400363 863 ntBASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CSMD1Q96PZ7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 AC007663.1-201ENST00000438948 1240 ntBASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 VENTXP5-201ENST00000523979 775 ntBASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 AC111152.3-201ENST00000569699 673 ntBASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 AC092119.3-201ENST00000612618 583 ntBASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CSMD1Q96PZ7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CSMD1Q96PZ7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
CSMD1Q96PZ7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
CSMD1Q96PZ7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSMD1Q96PZ7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.83■□□□□ 0.29
CSMD1Q96PZ7 ATP5G2P1-201ENST00000433580 426 ntBASIC16.83■□□□□ 0.29
CSMD1Q96PZ7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.83■□□□□ 0.29
CSMD1Q96PZ7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.83■□□□□ 0.29
CSMD1Q96PZ7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CSMD1Q96PZ7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.83■□□□□ 0.29
CSMD1Q96PZ7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.83■□□□□ 0.29
CSMD1Q96PZ7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.83■□□□□ 0.28
CSMD1Q96PZ7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.83■□□□□ 0.28
CSMD1Q96PZ7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSMD1Q96PZ7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.83■□□□□ 0.28
CSMD1Q96PZ7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CSMD1Q96PZ7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.83■□□□□ 0.28
CSMD1Q96PZ7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CSMD1Q96PZ7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.83■□□□□ 0.28
CSMD1Q96PZ7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSMD1Q96PZ7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSMD1Q96PZ7 AC127496.7-201ENST00000625110 1798 ntBASIC16.83■□□□□ 0.28
CSMD1Q96PZ7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSMD1Q96PZ7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSMD1Q96PZ7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSMD1Q96PZ7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 MIR3180-1-201ENST00000580374 94 ntBASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 MIR3180-3-201ENST00000584616 94 ntBASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 AL023803.3-201ENST00000615559 522 ntBASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSMD1Q96PZ7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSMD1Q96PZ7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms