Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 AC007663.1-201ENST00000438948 1240 ntBASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 AC141257.4-201ENST00000634557 245 ntBASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 AC136944.6-201ENST00000634818 245 ntBASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN4Q96NY8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 AL024507.2-201ENST00000606070 2574 ntBASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 PCED1CP-201ENST00000419887 785 ntBASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 TSPY17P-201ENST00000450329 467 ntBASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.46■□□□□ 0.87
NECTIN4Q96NY8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 AC092338.2-201ENST00000568827 1415 ntBASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 AC008040.2-201ENST00000461049 708 ntBASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 IER3-202ENST00000376377 1350 ntBASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NECTIN4Q96NY8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 AC233723.2-201ENST00000623798 2106 ntBASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 FAM86EP-206ENST00000510506 987 ntBASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 AL121894.2-201ENST00000602977 491 ntBASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 HLA-A-209ENST00000638375 975 ntBASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 Z98882.1-201ENST00000622160 2253 ntBASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NECTIN4Q96NY8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NECTIN4Q96NY8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms