Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21■□□□□ 0.95
ZNF558Q96NG5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF558Q96NG5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF558Q96NG5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF558Q96NG5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF558Q96NG5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF558Q96NG5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF558Q96NG5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF558Q96NG5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF558Q96NG5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF558Q96NG5 AC004951.3-201ENST00000418645 1148 ntBASIC21■□□□□ 0.95
ZNF558Q96NG5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ZNF558Q96NG5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21■□□□□ 0.95
ZNF558Q96NG5 AC087388.1-201ENST00000571370 1112 ntBASIC21■□□□□ 0.95
ZNF558Q96NG5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF558Q96NG5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21■□□□□ 0.95
ZNF558Q96NG5 AC006011.2-201ENST00000621313 1158 ntBASIC21■□□□□ 0.95
ZNF558Q96NG5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF558Q96NG5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF558Q96NG5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21■□□□□ 0.95
ZNF558Q96NG5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21■□□□□ 0.95
ZNF558Q96NG5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF558Q96NG5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF558Q96NG5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF558Q96NG5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 FAM87A-204ENST00000613235 858 ntBASIC20.99■□□□□ 0.95
ZNF558Q96NG5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
ZNF558Q96NG5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 WWOX-216ENST00000569818 525 ntBASIC20.98■□□□□ 0.95
ZNF558Q96NG5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF558Q96NG5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF558Q96NG5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF558Q96NG5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF558Q96NG5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF558Q96NG5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.97■□□□□ 0.95
ZNF558Q96NG5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF558Q96NG5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
ZNF558Q96NG5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF558Q96NG5 INGX-201ENST00000359239 846 ntBASIC20.97■□□□□ 0.95
ZNF558Q96NG5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
ZNF558Q96NG5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF558Q96NG5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF558Q96NG5 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.96■□□□□ 0.95
ZNF558Q96NG5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.96■□□□□ 0.95
ZNF558Q96NG5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 MFAP1P1-201ENST00000442257 1255 ntBASIC20.96■□□□□ 0.95
ZNF558Q96NG5 BX664615.1-201ENST00000443558 458 ntBASIC20.96■□□□□ 0.95
ZNF558Q96NG5 FAM207BP-201ENST00000447172 505 ntBASIC20.96■□□□□ 0.95
ZNF558Q96NG5 AC008040.2-201ENST00000461049 708 ntBASIC20.96■□□□□ 0.95
ZNF558Q96NG5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF558Q96NG5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms