Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.83■□□□□ 0.93
CALR3Q96L12 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CALR3Q96L12 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
CALR3Q96L12 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CALR3Q96L12 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CALR3Q96L12 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CALR3Q96L12 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CALR3Q96L12 KRT18P5-201ENST00000436075 1291 ntBASIC20.83■□□□□ 0.93
CALR3Q96L12 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.83■□□□□ 0.93
CALR3Q96L12 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.83■□□□□ 0.93
CALR3Q96L12 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CALR3Q96L12 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.83■□□□□ 0.93
CALR3Q96L12 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CALR3Q96L12 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CALR3Q96L12 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CALR3Q96L12 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALR3Q96L12 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.82■□□□□ 0.92
CALR3Q96L12 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CALR3Q96L12 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALR3Q96L12 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CALR3Q96L12 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALR3Q96L12 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALR3Q96L12 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALR3Q96L12 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CALR3Q96L12 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALR3Q96L12 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
CALR3Q96L12 AC010980.2-201ENST00000587099 1412 ntBASIC20.82■□□□□ 0.92
CALR3Q96L12 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALR3Q96L12 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.82■□□□□ 0.92
CALR3Q96L12 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
CALR3Q96L12 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.82■□□□□ 0.92
CALR3Q96L12 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.82■□□□□ 0.92
CALR3Q96L12 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.82■□□□□ 0.92
CALR3Q96L12 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALR3Q96L12 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.82■□□□□ 0.92
CALR3Q96L12 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CALR3Q96L12 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CALR3Q96L12 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CALR3Q96L12 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CALR3Q96L12 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.82■□□□□ 0.92
CALR3Q96L12 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CALR3Q96L12 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CALR3Q96L12 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CALR3Q96L12 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.81■□□□□ 0.92
CALR3Q96L12 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CALR3Q96L12 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CALR3Q96L12 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CALR3Q96L12 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.81■□□□□ 0.92
CALR3Q96L12 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.81■□□□□ 0.92
CALR3Q96L12 AC007322.1-201ENST00000426983 750 ntBASIC20.81■□□□□ 0.92
CALR3Q96L12 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.81■□□□□ 0.92
CALR3Q96L12 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.81■□□□□ 0.92
CALR3Q96L12 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CALR3Q96L12 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.81■□□□□ 0.92
CALR3Q96L12 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CALR3Q96L12 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CALR3Q96L12 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.81■□□□□ 0.92
CALR3Q96L12 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CALR3Q96L12 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CALR3Q96L12 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CALR3Q96L12 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CALR3Q96L12 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CALR3Q96L12 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CALR3Q96L12 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CALR3Q96L12 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.8■□□□□ 0.92
CALR3Q96L12 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.8■□□□□ 0.92
CALR3Q96L12 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.8■□□□□ 0.92
CALR3Q96L12 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.8■□□□□ 0.92
CALR3Q96L12 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
CALR3Q96L12 AC087623.3-201ENST00000607047 1098 ntBASIC20.8■□□□□ 0.92
CALR3Q96L12 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.8■□□□□ 0.92
CALR3Q96L12 BID-214ENST00000617586 542 ntTSL 5 BASIC20.8■□□□□ 0.92
CALR3Q96L12 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.8■□□□□ 0.92
CALR3Q96L12 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CALR3Q96L12 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CALR3Q96L12 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CALR3Q96L12 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.8■□□□□ 0.92
CALR3Q96L12 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CALR3Q96L12 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CALR3Q96L12 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALR3Q96L12 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALR3Q96L12 AL032819.2-201ENST00000624543 2162 ntBASIC20.79■□□□□ 0.92
CALR3Q96L12 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.79■□□□□ 0.92
CALR3Q96L12 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CALR3Q96L12 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms