Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
TMEM54Q969K7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM54Q969K7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM54Q969K7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.39■□□□□ 0.38
TMEM54Q969K7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.39■□□□□ 0.38
TMEM54Q969K7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TMEM54Q969K7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM54Q969K7 AL158211.5-201ENST00000623583 2518 ntBASIC17.39■□□□□ 0.37
TMEM54Q969K7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM54Q969K7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM54Q969K7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM54Q969K7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TMEM54Q969K7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM54Q969K7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM54Q969K7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM54Q969K7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM54Q969K7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM54Q969K7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM54Q969K7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM54Q969K7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM54Q969K7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TMEM54Q969K7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TMEM54Q969K7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM54Q969K7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM54Q969K7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TMEM54Q969K7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM54Q969K7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM54Q969K7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TMEM54Q969K7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TMEM54Q969K7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM54Q969K7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.38■□□□□ 0.37
TMEM54Q969K7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
TMEM54Q969K7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.38■□□□□ 0.37
TMEM54Q969K7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM54Q969K7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.38■□□□□ 0.37
TMEM54Q969K7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM54Q969K7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM54Q969K7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM54Q969K7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM54Q969K7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM54Q969K7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM54Q969K7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM54Q969K7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM54Q969K7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM54Q969K7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM54Q969K7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM54Q969K7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM54Q969K7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM54Q969K7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM54Q969K7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM54Q969K7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM54Q969K7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM54Q969K7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM54Q969K7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 AP006587.1-201ENST00000534129 1502 ntBASIC17.37■□□□□ 0.37
TMEM54Q969K7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TMEM54Q969K7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TMEM54Q969K7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM54Q969K7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM54Q969K7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM54Q969K7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM54Q969K7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TMEM54Q969K7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM54Q969K7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM54Q969K7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM54Q969K7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
TMEM54Q969K7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM54Q969K7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.36■□□□□ 0.37
TMEM54Q969K7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.36■□□□□ 0.37
TMEM54Q969K7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.36■□□□□ 0.37
TMEM54Q969K7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.36■□□□□ 0.37
TMEM54Q969K7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM54Q969K7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM54Q969K7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM54Q969K7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM54Q969K7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM54Q969K7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM54Q969K7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM54Q969K7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM54Q969K7 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.36■□□□□ 0.37
TMEM54Q969K7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM54Q969K7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM54Q969K7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms