Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTP4A1Q93096 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTP4A1Q93096 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.7■□□□□ 0.42
PTP4A1Q93096 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTP4A1Q93096 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.7■□□□□ 0.42
PTP4A1Q93096 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PTP4A1Q93096 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.7■□□□□ 0.42
PTP4A1Q93096 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.7■□□□□ 0.42
PTP4A1Q93096 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.7■□□□□ 0.42
PTP4A1Q93096 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTP4A1Q93096 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PTP4A1Q93096 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.7■□□□□ 0.42
PTP4A1Q93096 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTP4A1Q93096 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTP4A1Q93096 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.7■□□□□ 0.42
PTP4A1Q93096 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTP4A1Q93096 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTP4A1Q93096 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTP4A1Q93096 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTP4A1Q93096 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTP4A1Q93096 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
PTP4A1Q93096 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTP4A1Q93096 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTP4A1Q93096 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTP4A1Q93096 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.69■□□□□ 0.42
PTP4A1Q93096 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTP4A1Q93096 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.69■□□□□ 0.42
PTP4A1Q93096 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTP4A1Q93096 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTP4A1Q93096 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.69■□□□□ 0.42
PTP4A1Q93096 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.69■□□□□ 0.42
PTP4A1Q93096 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.69■□□□□ 0.42
PTP4A1Q93096 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.69■□□□□ 0.42
PTP4A1Q93096 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.69■□□□□ 0.42
PTP4A1Q93096 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTP4A1Q93096 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
PTP4A1Q93096 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PTP4A1Q93096 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTP4A1Q93096 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTP4A1Q93096 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
PTP4A1Q93096 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTP4A1Q93096 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.68■□□□□ 0.42
PTP4A1Q93096 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.68■□□□□ 0.42
PTP4A1Q93096 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTP4A1Q93096 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.68■□□□□ 0.42
PTP4A1Q93096 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTP4A1Q93096 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PTP4A1Q93096 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTP4A1Q93096 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTP4A1Q93096 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.68■□□□□ 0.42
PTP4A1Q93096 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTP4A1Q93096 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.68■□□□□ 0.42
PTP4A1Q93096 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTP4A1Q93096 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.68■□□□□ 0.42
PTP4A1Q93096 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTP4A1Q93096 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTP4A1Q93096 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.68■□□□□ 0.42
PTP4A1Q93096 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PTP4A1Q93096 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
PTP4A1Q93096 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTP4A1Q93096 CYP2T3P-201ENST00000601990 817 ntBASIC17.68■□□□□ 0.42
PTP4A1Q93096 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.68■□□□□ 0.42
PTP4A1Q93096 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PTP4A1Q93096 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTP4A1Q93096 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.68■□□□□ 0.42
PTP4A1Q93096 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PTP4A1Q93096 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTP4A1Q93096 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTP4A1Q93096 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTP4A1Q93096 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PTP4A1Q93096 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTP4A1Q93096 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.67■□□□□ 0.42
PTP4A1Q93096 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTP4A1Q93096 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTP4A1Q93096 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTP4A1Q93096 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTP4A1Q93096 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTP4A1Q93096 HLA-G-202ENST00000376815 851 ntBASIC17.67■□□□□ 0.42
PTP4A1Q93096 HLA-G-203ENST00000376818 1127 ntBASIC17.67■□□□□ 0.42
PTP4A1Q93096 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.67■□□□□ 0.42
PTP4A1Q93096 AC073111.5-205ENST00000641717 521 ntBASIC17.67■□□□□ 0.42
PTP4A1Q93096 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTP4A1Q93096 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTP4A1Q93096 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.67■□□□□ 0.42
PTP4A1Q93096 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PTP4A1Q93096 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTP4A1Q93096 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.67■□□□□ 0.42
PTP4A1Q93096 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
PTP4A1Q93096 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
PTP4A1Q93096 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTP4A1Q93096 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTP4A1Q93096 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTP4A1Q93096 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTP4A1Q93096 PHGDH-210ENST00000641115 1638 ntBASIC17.66■□□□□ 0.42
PTP4A1Q93096 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.66■□□□□ 0.42
PTP4A1Q93096 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PTP4A1Q93096 AL355472.2-201ENST00000422958 438 ntBASIC17.66■□□□□ 0.42
PTP4A1Q93096 CDCA4P2-201ENST00000441182 718 ntBASIC17.66■□□□□ 0.42
PTP4A1Q93096 AC026185.1-201ENST00000445748 174 ntBASIC17.66■□□□□ 0.42
PTP4A1Q93096 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms