Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RTF1Q92541 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.76■■□□□ 1.71
RTF1Q92541 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC25.76■■□□□ 1.71
RTF1Q92541 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC25.76■■□□□ 1.71
RTF1Q92541 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.76■■□□□ 1.71
RTF1Q92541 CR392000.1-201ENST00000624770 1228 ntBASIC25.76■■□□□ 1.71
RTF1Q92541 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC25.76■■□□□ 1.71
RTF1Q92541 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RTF1Q92541 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC25.76■■□□□ 1.71
RTF1Q92541 MOK-225ENST00000522867 1883 ntTSL 5 BASIC25.76■■□□□ 1.71
RTF1Q92541 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC25.76■■□□□ 1.71
RTF1Q92541 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RTF1Q92541 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.76■■□□□ 1.71
RTF1Q92541 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RTF1Q92541 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC25.75■■□□□ 1.71
RTF1Q92541 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTF1Q92541 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RTF1Q92541 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTF1Q92541 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
RTF1Q92541 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC25.75■■□□□ 1.71
RTF1Q92541 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTF1Q92541 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTF1Q92541 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
RTF1Q92541 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.75■■□□□ 1.71
RTF1Q92541 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC25.75■■□□□ 1.71
RTF1Q92541 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.75■■□□□ 1.71
RTF1Q92541 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RTF1Q92541 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTF1Q92541 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTF1Q92541 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC25.74■■□□□ 1.71
RTF1Q92541 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTF1Q92541 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RTF1Q92541 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RTF1Q92541 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC25.74■■□□□ 1.71
RTF1Q92541 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.74■■□□□ 1.71
RTF1Q92541 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC25.74■■□□□ 1.71
RTF1Q92541 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC25.74■■□□□ 1.71
RTF1Q92541 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTF1Q92541 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTF1Q92541 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTF1Q92541 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
RTF1Q92541 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.73■■□□□ 1.71
RTF1Q92541 NUDT16P1-203ENST00000513809 620 ntBASIC25.73■■□□□ 1.71
RTF1Q92541 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC25.73■■□□□ 1.71
RTF1Q92541 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.73■■□□□ 1.71
RTF1Q92541 AP001271.2-201ENST00000624018 1556 ntBASIC25.73■■□□□ 1.71
RTF1Q92541 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC25.73■■□□□ 1.71
RTF1Q92541 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTF1Q92541 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RTF1Q92541 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RTF1Q92541 KRT16P1-201ENST00000399124 1418 ntBASIC25.72■■□□□ 1.71
RTF1Q92541 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
RTF1Q92541 AL162377.1-201ENST00000618844 1793 ntBASIC25.72■■□□□ 1.71
RTF1Q92541 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTF1Q92541 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RTF1Q92541 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC25.72■■□□□ 1.71
RTF1Q92541 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
RTF1Q92541 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.72■■□□□ 1.71
RTF1Q92541 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTF1Q92541 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC25.72■■□□□ 1.71
RTF1Q92541 GOLGA2P11-201ENST00000562660 1621 ntBASIC25.72■■□□□ 1.71
RTF1Q92541 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RTF1Q92541 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
RTF1Q92541 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTF1Q92541 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTF1Q92541 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTF1Q92541 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTF1Q92541 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.72■■□□□ 1.71
RTF1Q92541 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTF1Q92541 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RTF1Q92541 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTF1Q92541 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.71■■□□□ 1.71
RTF1Q92541 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC25.71■■□□□ 1.71
RTF1Q92541 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RTF1Q92541 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTF1Q92541 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RTF1Q92541 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC25.71■■□□□ 1.71
RTF1Q92541 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.71■■□□□ 1.71
RTF1Q92541 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RTF1Q92541 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC25.71■■□□□ 1.71
RTF1Q92541 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
RTF1Q92541 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
RTF1Q92541 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC25.71■■□□□ 1.71
RTF1Q92541 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC25.71■■□□□ 1.71
RTF1Q92541 AC092667.1-201ENST00000434301 2586 ntBASIC25.71■■□□□ 1.71
RTF1Q92541 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC25.71■■□□□ 1.71
RTF1Q92541 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
RTF1Q92541 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RTF1Q92541 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC25.7■■□□□ 1.71
RTF1Q92541 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
RTF1Q92541 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
RTF1Q92541 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RTF1Q92541 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC25.7■■□□□ 1.7
RTF1Q92541 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RTF1Q92541 AC211429.1-201ENST00000415277 523 ntBASIC25.7■■□□□ 1.7
RTF1Q92541 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC25.7■■□□□ 1.7
RTF1Q92541 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
RTF1Q92541 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RTF1Q92541 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
RTF1Q92541 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms