Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.06■□□□□ 0.96
SHC3Q92529 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SHC3Q92529 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SHC3Q92529 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.06■□□□□ 0.96
SHC3Q92529 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.06■□□□□ 0.96
SHC3Q92529 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.06■□□□□ 0.96
SHC3Q92529 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.06■□□□□ 0.96
SHC3Q92529 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.06■□□□□ 0.96
SHC3Q92529 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SHC3Q92529 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHC3Q92529 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SHC3Q92529 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHC3Q92529 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SHC3Q92529 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.05■□□□□ 0.96
SHC3Q92529 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHC3Q92529 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHC3Q92529 AC093484.2-201ENST00000580996 2166 ntBASIC21.05■□□□□ 0.96
SHC3Q92529 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.05■□□□□ 0.96
SHC3Q92529 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SHC3Q92529 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SHC3Q92529 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHC3Q92529 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.05■□□□□ 0.96
SHC3Q92529 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.05■□□□□ 0.96
SHC3Q92529 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHC3Q92529 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.05■□□□□ 0.96
SHC3Q92529 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SHC3Q92529 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SHC3Q92529 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SHC3Q92529 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
SHC3Q92529 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHC3Q92529 AC007952.6-201ENST00000573168 2673 ntBASIC21.04■□□□□ 0.96
SHC3Q92529 AC003957.1-201ENST00000625108 2673 ntBASIC21.04■□□□□ 0.96
SHC3Q92529 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC3Q92529 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC3Q92529 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHC3Q92529 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC3Q92529 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC3Q92529 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.04■□□□□ 0.96
SHC3Q92529 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SHC3Q92529 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC3Q92529 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC3Q92529 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHC3Q92529 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC3Q92529 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SHC3Q92529 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHC3Q92529 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SHC3Q92529 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC3Q92529 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.03■□□□□ 0.96
SHC3Q92529 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC3Q92529 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC3Q92529 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHC3Q92529 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC3Q92529 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC3Q92529 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHC3Q92529 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.03■□□□□ 0.96
SHC3Q92529 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.03■□□□□ 0.96
SHC3Q92529 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.03■□□□□ 0.96
SHC3Q92529 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SHC3Q92529 AC008687.6-201ENST00000596318 630 ntBASIC21.03■□□□□ 0.96
SHC3Q92529 AL121906.2-201ENST00000621597 723 ntBASIC21.03■□□□□ 0.96
SHC3Q92529 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC3Q92529 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC3Q92529 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC3Q92529 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.03■□□□□ 0.96
SHC3Q92529 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC3Q92529 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SHC3Q92529 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SHC3Q92529 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC3Q92529 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHC3Q92529 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.02■□□□□ 0.96
SHC3Q92529 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHC3Q92529 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHC3Q92529 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHC3Q92529 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHC3Q92529 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.02■□□□□ 0.96
SHC3Q92529 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.02■□□□□ 0.96
SHC3Q92529 UNC93B4-201ENST00000505679 747 ntBASIC21.02■□□□□ 0.96
SHC3Q92529 UNC93B5-201ENST00000530315 699 ntBASIC21.02■□□□□ 0.96
SHC3Q92529 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SHC3Q92529 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHC3Q92529 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.02■□□□□ 0.96
SHC3Q92529 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.02■□□□□ 0.96
SHC3Q92529 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHC3Q92529 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHC3Q92529 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.02■□□□□ 0.95
SHC3Q92529 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.02■□□□□ 0.95
SHC3Q92529 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHC3Q92529 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC3Q92529 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC3Q92529 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHC3Q92529 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.01■□□□□ 0.95
SHC3Q92529 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
SHC3Q92529 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC3Q92529 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC3Q92529 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.01■□□□□ 0.95
SHC3Q92529 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC3Q92529 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC3Q92529 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC3Q92529 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.01■□□□□ 0.95
SHC3Q92529 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms