Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 AC080038.1-201ENST00000611274 1154 ntBASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RTN4IP1Q8WWV3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN4IP1Q8WWV3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 PGM5P4-201ENST00000421970 445 ntBASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 CYP2T1P-201ENST00000432607 1285 ntBASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 RARRES2P4-201ENST00000514074 484 ntBASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 AC069236.1-201ENST00000604339 616 ntBASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
RTN4IP1Q8WWV3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms