Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 RARRES2P4-201ENST00000514074 484 ntBASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 MFSD11-216ENST00000590393 1141 ntBASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.24■□□□□ 0.35
RPS4Y2Q8TD47 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 HLA-G-202ENST00000376815 851 ntBASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 HLA-G-203ENST00000376818 1127 ntBASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 AC023632.3-201ENST00000521633 145 ntBASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4Y2Q8TD47 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RPS4Y2Q8TD47 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 KRT18P68-201ENST00000392293 1000 ntBASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4Y2Q8TD47 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms