Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 AC093787.1-201ENST00000450396 207 ntBASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 KRT8P17-201ENST00000453110 1448 ntBASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 AC093484.2-201ENST00000580996 2166 ntBASIC20.51■□□□□ 0.87
CCHCR1Q8TD31 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 AL109923.1-201ENST00000618799 583 ntBASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.5■□□□□ 0.87
CCHCR1Q8TD31 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 PTBP1P-201ENST00000554374 1601 ntBASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CCHCR1Q8TD31 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 ID1-201ENST00000376105 1233 ntBASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 TSPY6P-201ENST00000448518 926 ntBASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCHCR1Q8TD31 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 AP001271.2-201ENST00000624018 1556 ntBASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 CYP2T3P-201ENST00000601990 817 ntBASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 AL031963.3-201ENST00000606441 850 ntBASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.47■□□□□ 0.87
CCHCR1Q8TD31 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms