Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF217Q8TC41 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF217Q8TC41 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF217Q8TC41 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
RNF217Q8TC41 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF217Q8TC41 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF217Q8TC41 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF217Q8TC41 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF217Q8TC41 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.89■□□□□ 0.61
RNF217Q8TC41 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF217Q8TC41 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF217Q8TC41 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF217Q8TC41 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF217Q8TC41 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF217Q8TC41 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF217Q8TC41 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF217Q8TC41 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF217Q8TC41 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF217Q8TC41 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF217Q8TC41 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF217Q8TC41 YBX1P1-201ENST00000445822 960 ntBASIC18.88■□□□□ 0.61
RNF217Q8TC41 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF217Q8TC41 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF217Q8TC41 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF217Q8TC41 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF217Q8TC41 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF217Q8TC41 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF217Q8TC41 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF217Q8TC41 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF217Q8TC41 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF217Q8TC41 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF217Q8TC41 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF217Q8TC41 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF217Q8TC41 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RNF217Q8TC41 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF217Q8TC41 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 AC123595.1-201ENST00000440769 1046 ntBASIC18.87■□□□□ 0.61
RNF217Q8TC41 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF217Q8TC41 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RNF217Q8TC41 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF217Q8TC41 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF217Q8TC41 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF217Q8TC41 DUX4L2-201ENST00000561772 1275 ntBASIC18.87■□□□□ 0.61
RNF217Q8TC41 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF217Q8TC41 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 AP001160.3-201ENST00000601484 763 ntBASIC18.87■□□□□ 0.61
RNF217Q8TC41 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.87■□□□□ 0.61
RNF217Q8TC41 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
RNF217Q8TC41 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RNF217Q8TC41 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 DUX4L6-201ENST00000626483 1275 ntBASIC18.87■□□□□ 0.61
RNF217Q8TC41 DUX4L1-201ENST00000627662 1275 ntBASIC18.87■□□□□ 0.61
RNF217Q8TC41 DUX4L8-201ENST00000629013 1275 ntBASIC18.87■□□□□ 0.61
RNF217Q8TC41 DUX4L3-201ENST00000630187 1275 ntBASIC18.87■□□□□ 0.61
RNF217Q8TC41 DUX4L7-201ENST00000630678 1275 ntBASIC18.87■□□□□ 0.61
RNF217Q8TC41 DUX4L5-201ENST00000630834 1275 ntBASIC18.87■□□□□ 0.61
RNF217Q8TC41 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF217Q8TC41 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
RNF217Q8TC41 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF217Q8TC41 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
RNF217Q8TC41 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF217Q8TC41 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF217Q8TC41 AC011484.1-201ENST00000377652 1995 ntBASIC18.86■□□□□ 0.61
RNF217Q8TC41 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF217Q8TC41 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF217Q8TC41 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF217Q8TC41 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
RNF217Q8TC41 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF217Q8TC41 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF217Q8TC41 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RNF217Q8TC41 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF217Q8TC41 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF217Q8TC41 ZNRF2P3-201ENST00000424200 374 ntBASIC18.86■□□□□ 0.61
RNF217Q8TC41 AC010141.2-201ENST00000452426 721 ntBASIC18.86■□□□□ 0.61
RNF217Q8TC41 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF217Q8TC41 KRT18P14-201ENST00000534205 1250 ntBASIC18.86■□□□□ 0.61
RNF217Q8TC41 CCDC92B-201ENST00000575506 885 ntBASIC18.86■□□□□ 0.61
RNF217Q8TC41 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RNF217Q8TC41 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF217Q8TC41 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RNF217Q8TC41 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF217Q8TC41 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF217Q8TC41 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RNF217Q8TC41 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF217Q8TC41 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF217Q8TC41 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF217Q8TC41 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms