Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC30.94■■■□□ 2.54
VPS8Q8N3P4 CD177P1-201ENST00000606252 935 ntBASIC30.94■■■□□ 2.54
VPS8Q8N3P4 AC073195.1-201ENST00000607241 877 ntBASIC30.94■■■□□ 2.54
VPS8Q8N3P4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
VPS8Q8N3P4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC30.94■■■□□ 2.54
VPS8Q8N3P4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
VPS8Q8N3P4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC30.93■■■□□ 2.54
VPS8Q8N3P4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
VPS8Q8N3P4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC30.93■■■□□ 2.54
VPS8Q8N3P4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC30.93■■■□□ 2.54
VPS8Q8N3P4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC30.93■■■□□ 2.54
VPS8Q8N3P4 AP001412.1-201ENST00000608405 714 ntBASIC30.93■■■□□ 2.54
VPS8Q8N3P4 AL445675.2-201ENST00000620291 557 ntBASIC30.93■■■□□ 2.54
VPS8Q8N3P4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
VPS8Q8N3P4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
VPS8Q8N3P4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC30.93■■■□□ 2.54
VPS8Q8N3P4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
VPS8Q8N3P4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
VPS8Q8N3P4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
VPS8Q8N3P4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
VPS8Q8N3P4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
VPS8Q8N3P4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
VPS8Q8N3P4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
VPS8Q8N3P4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC30.92■■■□□ 2.54
VPS8Q8N3P4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC30.92■■■□□ 2.54
VPS8Q8N3P4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC30.92■■■□□ 2.54
VPS8Q8N3P4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC30.92■■■□□ 2.54
VPS8Q8N3P4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC30.92■■■□□ 2.54
VPS8Q8N3P4 HLA-A-209ENST00000638375 975 ntBASIC30.92■■■□□ 2.54
VPS8Q8N3P4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
VPS8Q8N3P4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
VPS8Q8N3P4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
VPS8Q8N3P4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
VPS8Q8N3P4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
VPS8Q8N3P4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
VPS8Q8N3P4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
VPS8Q8N3P4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
VPS8Q8N3P4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC30.91■■■□□ 2.54
VPS8Q8N3P4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
VPS8Q8N3P4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
VPS8Q8N3P4 FAM197Y1-201ENST00000421178 764 ntBASIC30.91■■■□□ 2.54
VPS8Q8N3P4 KSR1P1-201ENST00000446298 240 ntBASIC30.91■■■□□ 2.54
VPS8Q8N3P4 AP002982.1-201ENST00000492365 877 ntBASIC30.91■■■□□ 2.54
VPS8Q8N3P4 NUDT16P1-203ENST00000513809 620 ntBASIC30.91■■■□□ 2.54
VPS8Q8N3P4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC30.91■■■□□ 2.54
VPS8Q8N3P4 MIR4785-201ENST00000585005 73 ntBASIC30.91■■■□□ 2.54
VPS8Q8N3P4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC30.91■■■□□ 2.54
VPS8Q8N3P4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
VPS8Q8N3P4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC30.91■■■□□ 2.54
VPS8Q8N3P4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC30.91■■■□□ 2.54
VPS8Q8N3P4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
VPS8Q8N3P4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC30.91■■■□□ 2.54
VPS8Q8N3P4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
VPS8Q8N3P4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC30.91■■■□□ 2.54
VPS8Q8N3P4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 AC026271.3-201ENST00000571884 352 ntBASIC30.9■■■□□ 2.54
VPS8Q8N3P4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 KRT16P1-201ENST00000399124 1418 ntBASIC30.9■■■□□ 2.54
VPS8Q8N3P4 KRT8P8-201ENST00000434750 1448 ntBASIC30.9■■■□□ 2.54
VPS8Q8N3P4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 AC112907.3-201ENST00000577781 2400 ntBASIC30.9■■■□□ 2.54
VPS8Q8N3P4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 AL355075.4-201ENST00000554988 638 ntBASIC30.9■■■□□ 2.54
VPS8Q8N3P4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC30.9■■■□□ 2.54
VPS8Q8N3P4 ABBA01031674.1-201ENST00000635145 728 ntBASIC30.9■■■□□ 2.54
VPS8Q8N3P4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC30.89■■■□□ 2.54
VPS8Q8N3P4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
VPS8Q8N3P4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
VPS8Q8N3P4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
VPS8Q8N3P4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC30.89■■■□□ 2.54
VPS8Q8N3P4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
VPS8Q8N3P4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
VPS8Q8N3P4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.53
VPS8Q8N3P4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
VPS8Q8N3P4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC30.89■■■□□ 2.53
VPS8Q8N3P4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
VPS8Q8N3P4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
VPS8Q8N3P4 AC026471.5-201ENST00000615068 467 ntBASIC30.89■■■□□ 2.53
VPS8Q8N3P4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
VPS8Q8N3P4 LBX2-AS1-202ENST00000603175 2083 ntBASIC30.88■■■□□ 2.53
VPS8Q8N3P4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
VPS8Q8N3P4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
VPS8Q8N3P4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC30.88■■■□□ 2.53
VPS8Q8N3P4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms