Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC170Q8IYT3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC170Q8IYT3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC170Q8IYT3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC170Q8IYT3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 AC023632.3-201ENST00000521633 145 ntBASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC170Q8IYT3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC170Q8IYT3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC170Q8IYT3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC170Q8IYT3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC170Q8IYT3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 AL138781.2-201ENST00000617896 1843 ntBASIC21.13■□□□□ 0.97
CCDC170Q8IYT3 AC068338.2-201ENST00000563278 1430 ntBASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 ZNRF2P3-201ENST00000424200 374 ntBASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 CYP2T3P-201ENST00000601990 817 ntBASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC170Q8IYT3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC170Q8IYT3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC170Q8IYT3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCDC170Q8IYT3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CCDC170Q8IYT3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC170Q8IYT3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC170Q8IYT3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CCDC170Q8IYT3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC170Q8IYT3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC170Q8IYT3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms