Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 AC098818.2-201ENST00000564925 2320 ntBASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC50Q8IVM0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.77■□□□□ 0.91
CCDC50Q8IVM0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC50Q8IVM0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC50Q8IVM0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
CCDC50Q8IVM0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC50Q8IVM0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 AL589743.5-201ENST00000616611 1050 ntBASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC50Q8IVM0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms