Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 AC026310.3-201ENST00000625186 2373 ntBASIC21.21■□□□□ 0.99
NPAS4Q8IUM7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
NPAS4Q8IUM7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 INGX-201ENST00000359239 846 ntBASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPAS4Q8IUM7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 BX664615.1-201ENST00000443558 458 ntBASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 AC008040.2-201ENST00000461049 708 ntBASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPAS4Q8IUM7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 HMGA1P5-201ENST00000412453 271 ntBASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 AC096733.2-201ENST00000609937 1394 ntBASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPAS4Q8IUM7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 MFAP1P1-201ENST00000442257 1255 ntBASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 FAM207BP-201ENST00000447172 505 ntBASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPAS4Q8IUM7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 AK4P3-201ENST00000418260 669 ntBASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 AC116562.4-202ENST00000641738 218 ntBASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPAS4Q8IUM7 TMEM179-206ENST00000616017 1645 ntBASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPAS4Q8IUM7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms