Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.8■□□□□ 0.6
RAB43Q86YS6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB43Q86YS6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB43Q86YS6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB43Q86YS6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB43Q86YS6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.8■□□□□ 0.6
RAB43Q86YS6 AC073912.3-201ENST00000624414 853 ntBASIC18.8■□□□□ 0.6
RAB43Q86YS6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RAB43Q86YS6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB43Q86YS6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB43Q86YS6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB43Q86YS6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB43Q86YS6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB43Q86YS6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB43Q86YS6 AC121338.2-201ENST00000622535 1744 ntBASIC18.8■□□□□ 0.6
RAB43Q86YS6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
RAB43Q86YS6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB43Q86YS6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB43Q86YS6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB43Q86YS6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB43Q86YS6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB43Q86YS6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB43Q86YS6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RAB43Q86YS6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB43Q86YS6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB43Q86YS6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB43Q86YS6 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB43Q86YS6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB43Q86YS6 RARRES2P10-201ENST00000564312 460 ntBASIC18.79■□□□□ 0.6
RAB43Q86YS6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB43Q86YS6 AL121829.2-201ENST00000620908 328 ntBASIC18.79■□□□□ 0.6
RAB43Q86YS6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB43Q86YS6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB43Q86YS6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB43Q86YS6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB43Q86YS6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB43Q86YS6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB43Q86YS6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RAB43Q86YS6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB43Q86YS6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB43Q86YS6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.78■□□□□ 0.6
RAB43Q86YS6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB43Q86YS6 AL049796.1-201ENST00000565336 1766 ntBASIC18.78■□□□□ 0.6
RAB43Q86YS6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB43Q86YS6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB43Q86YS6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RAB43Q86YS6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB43Q86YS6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB43Q86YS6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RAB43Q86YS6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB43Q86YS6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB43Q86YS6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB43Q86YS6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB43Q86YS6 AL049637.2-201ENST00000641778 930 ntBASIC18.78■□□□□ 0.6
RAB43Q86YS6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB43Q86YS6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAB43Q86YS6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB43Q86YS6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB43Q86YS6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB43Q86YS6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB43Q86YS6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB43Q86YS6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB43Q86YS6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB43Q86YS6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB43Q86YS6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB43Q86YS6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB43Q86YS6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB43Q86YS6 AL121906.2-201ENST00000621597 723 ntBASIC18.77■□□□□ 0.6
RAB43Q86YS6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB43Q86YS6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB43Q86YS6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB43Q86YS6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RAB43Q86YS6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB43Q86YS6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB43Q86YS6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB43Q86YS6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
RAB43Q86YS6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB43Q86YS6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RAB43Q86YS6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB43Q86YS6 FEM1AP1-201ENST00000431297 1995 ntBASIC18.76■□□□□ 0.59
RAB43Q86YS6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 HLA-G-202ENST00000376815 851 ntBASIC18.76■□□□□ 0.59
RAB43Q86YS6 HLA-G-203ENST00000376818 1127 ntBASIC18.76■□□□□ 0.59
RAB43Q86YS6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.76■□□□□ 0.59
RAB43Q86YS6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB43Q86YS6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB43Q86YS6 MIR4785-201ENST00000585005 73 ntBASIC18.76■□□□□ 0.59
RAB43Q86YS6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB43Q86YS6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms