Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTTNQ86VV8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RTTNQ86VV8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTTNQ86VV8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.37■□□□□ 0.37
RTTNQ86VV8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTTNQ86VV8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTTNQ86VV8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTTNQ86VV8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RTTNQ86VV8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.37■□□□□ 0.37
RTTNQ86VV8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
RTTNQ86VV8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.37■□□□□ 0.37
RTTNQ86VV8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTTNQ86VV8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.37■□□□□ 0.37
RTTNQ86VV8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RTTNQ86VV8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RTTNQ86VV8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.37■□□□□ 0.37
RTTNQ86VV8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTTNQ86VV8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTTNQ86VV8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 BX119927.1-201ENST00000636596 1552 ntBASIC17.36■□□□□ 0.37
RTTNQ86VV8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.36■□□□□ 0.37
RTTNQ86VV8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.36■□□□□ 0.37
RTTNQ86VV8 PNMA6B-201ENST00000538162 1200 ntBASIC17.36■□□□□ 0.37
RTTNQ86VV8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.36■□□□□ 0.37
RTTNQ86VV8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RTTNQ86VV8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 KRT8P17-201ENST00000453110 1448 ntBASIC17.36■□□□□ 0.37
RTTNQ86VV8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.36■□□□□ 0.37
RTTNQ86VV8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.36■□□□□ 0.37
RTTNQ86VV8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTTNQ86VV8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RTTNQ86VV8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.35■□□□□ 0.37
RTTNQ86VV8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.35■□□□□ 0.37
RTTNQ86VV8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.35■□□□□ 0.37
RTTNQ86VV8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.35■□□□□ 0.37
RTTNQ86VV8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTTNQ86VV8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTTNQ86VV8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTTNQ86VV8 UBE2SP1-201ENST00000450587 669 ntBASIC17.35■□□□□ 0.37
RTTNQ86VV8 AP003097.1-201ENST00000530657 1135 ntBASIC17.35■□□□□ 0.37
RTTNQ86VV8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RTTNQ86VV8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTTNQ86VV8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTTNQ86VV8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.35■□□□□ 0.37
RTTNQ86VV8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.35■□□□□ 0.37
RTTNQ86VV8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTTNQ86VV8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.35■□□□□ 0.37
RTTNQ86VV8 AC007952.6-201ENST00000573168 2673 ntBASIC17.35■□□□□ 0.37
RTTNQ86VV8 AC003957.1-201ENST00000625108 2673 ntBASIC17.35■□□□□ 0.37
RTTNQ86VV8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTTNQ86VV8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTTNQ86VV8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTTNQ86VV8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTTNQ86VV8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTTNQ86VV8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTTNQ86VV8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTTNQ86VV8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTTNQ86VV8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RTTNQ86VV8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.35■□□□□ 0.37
RTTNQ86VV8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.35■□□□□ 0.37
RTTNQ86VV8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.35■□□□□ 0.37
RTTNQ86VV8 AC120498.8-201ENST00000614275 531 ntBASIC17.35■□□□□ 0.37
RTTNQ86VV8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RTTNQ86VV8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RTTNQ86VV8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
RTTNQ86VV8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RTTNQ86VV8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTTNQ86VV8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTTNQ86VV8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTTNQ86VV8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.34■□□□□ 0.37
RTTNQ86VV8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.34■□□□□ 0.37
RTTNQ86VV8 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.34■□□□□ 0.37
RTTNQ86VV8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTTNQ86VV8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.34■□□□□ 0.37
RTTNQ86VV8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RTTNQ86VV8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.34■□□□□ 0.37
RTTNQ86VV8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.34■□□□□ 0.37
RTTNQ86VV8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RTTNQ86VV8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RTTNQ86VV8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RTTNQ86VV8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTTNQ86VV8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTTNQ86VV8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.34■□□□□ 0.37
RTTNQ86VV8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTTNQ86VV8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTTNQ86VV8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms