Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MRPL55Q7Z7F7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC12.68□□□□□ -0.38
MRPL55Q7Z7F7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MRPL55Q7Z7F7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
MRPL55Q7Z7F7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MRPL55Q7Z7F7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MRPL55Q7Z7F7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
MRPL55Q7Z7F7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MRPL55Q7Z7F7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
MRPL55Q7Z7F7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
MRPL55Q7Z7F7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC12.68□□□□□ -0.38
MRPL55Q7Z7F7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MRPL55Q7Z7F7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
MRPL55Q7Z7F7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 MDK-213ENST00000617138 635 ntTSL 2 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 AC105020.6-201ENST00000621523 1217 ntBASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 AC231657.2-201ENST00000624556 255 ntBASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 KRT16P6-202ENST00000425692 1426 ntBASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 AC068338.2-201ENST00000563278 1430 ntBASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL55Q7Z7F7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 KRT8P20-201ENST00000423953 1409 ntBASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 KRT8P17-201ENST00000453110 1448 ntBASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 KRT18P68-201ENST00000392293 1000 ntBASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 AC006015.1-201ENST00000429970 570 ntBASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 CYP2T1P-201ENST00000432607 1285 ntBASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 CNN2P6-201ENST00000439038 900 ntBASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 DUX4L16-201ENST00000555130 1264 ntBASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 MIR5787-201ENST00000611784 55 ntBASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC12.66□□□□□ -0.38
MRPL55Q7Z7F7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
MRPL55Q7Z7F7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms